RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 OR2AT4A6NND4 320 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 SSX5O60225 188 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 LMX1BO60663 402 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 HCKP08631 526 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 FAM87AP0C7U9 286 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 LIPCP11150 499 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 NAT2P11245 290 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 CTRB1P17538 263 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 MSR1P21757 451 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 CPT2P23786 658 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 SLC6A9P48067 706 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 ZNF121P58317 390 aaPredicted RBP9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 PPIAP62937 165 aaKnown RBP9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 CSNK2A1P68400 391 aaPredicted RBP9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 HIST1H3AP68431 136 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 ZNF273Q14593 569 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 EXT1Q16394 746 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 NKPD1Q17RQ9 610 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 HIST2H3PS2Q5TEC6 136 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 CTRB2Q6GPI1 263 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 PRSS54Q6PEW0 395 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 DRAM2Q6UX65 266 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 TMPPEQ6ZT21 453 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 HIST2H3AQ71DI3 136 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 SLC16A14Q7RTX9 510 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 PPP1R3BQ86XI6 285 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 ZNF283Q8N7M2 679 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 OR4S1Q8NGB4 309 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 RNF141Q8WVD5 230 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 NUDCD2Q8WVJ2 157 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 EMG1Q92979 244 aaKnown RBP9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 TMEM54Q969K7 222 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 MARC2Q969Z3 335 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 MRGPRFQ96AM1 343 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 MRPS24Q96EL2 167 aaKnown RBP9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 DNAJA3Q96EY1 480 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 TMEM41AQ96HV5 264 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 OR5B2Q96R09 309 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 OR6C1Q96RD1 312 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 SPSB2Q99619 263 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 NELFAQ9H3P2 528 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 SEC61A2Q9H9S3 476 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 PNRC2Q9NPJ4 139 aaKnown RBP9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 GPR84Q9NQS5 396 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 FOXJ2Q9P0K8 574 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 ZNF391Q9UJN7 358 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 EDARQ9UNE0 448 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 KCNK7Q9Y2U2 307 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 FLVCR1Q9Y5Y0 555 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 V9GYS6 101 aa9.31□□□□□ -0.92
GTF3C2-206ENST00000454704 LRRK2Q5S007 2527 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 FLNCQ14315 2725 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 IGHV3-20A0A0C4DH32 117 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 GJE1A6NN92 205 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 F5H0A9 414 aaPredicted RBP9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 EFNA2O43921 213 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 ZNF354AO60765 605 aaPredicted RBP9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 SCO1O75880 301 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 DHRS3O75911 302 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 MPIG6BO95866 241 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 CD63P08962 238 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 QDPRP09417 244 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 FGF5P12034 268 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 GNB3P16520 340 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 VAMP1P23763 118 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 OTX1P32242 354 aaPredicted RBP9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 OR3A2P47893 321 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 CSNK1A1P48729 337 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 LUMP51884 338 aaPredicted RBP9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 SUCLG1P53597 346 aaKnown RBP9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 ATP1B3P54709 279 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 TRA2AQ13595 282 aaKnown RBP eCLIP9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 IL11RAQ14626 422 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 SMUG1Q53HV7 270 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 FAM69BQ5VUD6 431 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 MRPL14Q6P1L8 145 aaKnown RBP9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 IL34Q6ZMJ4 242 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 COMMD2Q86X83 199 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 PMEPA1Q969W9 287 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 NTNG2Q96CW9 530 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 SAT2Q96F10 170 aaPredicted RBP9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 PIK3IP1Q96FE7 263 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 PGAM5Q96HS1 289 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 AQP10Q96PS8 301 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 RASL10BQ96S79 203 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 GPER1Q99527 375 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 EMC6Q9BV81 110 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 SF3B5Q9BWJ5 86 aaKnown RBP9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 ZMAT3Q9HA38 289 aaKnown RBP9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 C12orf4Q9NQ89 552 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 TAS2R3Q9NYW6 316 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 IL17BQ9UHF5 180 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 GPR160Q9UJ42 338 aa9.3□□□□□ -0.92
GTF3C2-206ENST00000454704 NBASA2RRP1 2371 aa9.29□□□□□ -0.92
GTF3C2-206ENST00000454704 LOC101059948A0A1B0GTJ6 334 aa9.29□□□□□ -0.92
GTF3C2-206ENST00000454704 C5orf51A6NDU8 294 aa9.29□□□□□ -0.92
GTF3C2-206ENST00000454704 FOXI3A8MTJ6 420 aaPredicted RBP9.29□□□□□ -0.92
GTF3C2-206ENST00000454704 ABCD4O14678 606 aa9.29□□□□□ -0.92
GTF3C2-206ENST00000454704 TERTO14746 1132 aaKnown RBP9.29□□□□□ -0.92
GTF3C2-206ENST00000454704 IGHEP01854 428 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms