RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 IL5RAQ01344 420 aa13.77□□□□□ -0.21
UBE2D4-209ENST00000454428 TIGD6Q17RP2 521 aa13.77□□□□□ -0.21
UBE2D4-209ENST00000454428 C10orf99Q6UWK7 81 aa13.77□□□□□ -0.21
UBE2D4-209ENST00000454428 OR52J3Q8NH60 311 aa13.77□□□□□ -0.21
UBE2D4-209ENST00000454428 RPS4Y2Q8TD47 263 aa13.77□□□□□ -0.21
UBE2D4-209ENST00000454428 C7orf34Q96L11 122 aa13.77□□□□□ -0.21
UBE2D4-209ENST00000454428 RTL8AQ9BWD3 113 aa13.77□□□□□ -0.21
UBE2D4-209ENST00000454428 LRP12Q9Y561 859 aa13.77□□□□□ -0.21
UBE2D4-209ENST00000454428 TSSC4Q9Y5U2 329 aaPredicted RBP13.77□□□□□ -0.21
UBE2D4-209ENST00000454428 TCRBV4S1A1TA0A5B7 111 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 TMEM210A6NLX4 147 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 ZNF850A8MQ14 1090 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 ZNF878C9JN71 531 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 IDH3BO43837 385 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 GLCEO94923 617 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 ANXA2P07355 339 aaKnown RBP13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 GLRA1P23415 457 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 SLC25A1P53007 311 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 DLX6P56179 175 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 KLF10Q13118 480 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 PRDX4Q13162 271 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 ZNF273Q14593 569 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 TAF13Q15543 124 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 SSX2Q16385 188 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 ZNF782Q6ZMW2 699 aaPredicted RBP13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 ETV3LQ6ZN32 361 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 SLC15A3Q8IY34 581 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 PROKR2Q8NFJ6 384 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 YY1AP1Q9H869 796 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 GAR1Q9NY12 217 aaKnown RBP13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 PITPNC1Q9UKF7 332 aa13.76□□□□□ -0.21
UBE2D4-209ENST00000454428 DHRS12A0PJE2 317 aa13.75□□□□□ -0.21
UBE2D4-209ENST00000454428 SPARCP09486 303 aa13.75□□□□□ -0.21
UBE2D4-209ENST00000454428 RHCEP18577 417 aa13.75□□□□□ -0.21
UBE2D4-209ENST00000454428 DYNLT3P51808 116 aa13.75□□□□□ -0.21
UBE2D4-209ENST00000454428 LIPEQ05469 1076 aa13.75□□□□□ -0.21
UBE2D4-209ENST00000454428 FAM57BQ71RH2 274 aa13.75□□□□□ -0.21
UBE2D4-209ENST00000454428 MRPL41Q8IXM3 137 aaKnown RBP13.75□□□□□ -0.21
UBE2D4-209ENST00000454428 ZNF511Q8NB15 262 aa13.75□□□□□ -0.21
UBE2D4-209ENST00000454428 CSNK2A3Q8NEV1 391 aa13.75□□□□□ -0.21
UBE2D4-209ENST00000454428 MALSU1Q96EH3 234 aa13.75□□□□□ -0.21
UBE2D4-209ENST00000454428 GID8Q9NWU2 228 aa13.75□□□□□ -0.21
UBE2D4-209ENST00000454428 PCDHGB5Q9Y5G0 923 aa13.75□□□□□ -0.21
UBE2D4-209ENST00000454428 MPC1Q9Y5U8 109 aa13.75□□□□□ -0.21
UBE2D4-209ENST00000454428 ANXA2P2A6NMY6 339 aa13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 CHRM2P08172 466 aa13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 CCDC159P0C7I6 412 aa13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 ENTPD1P49961 510 aa13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 ZNF121P58317 390 aaPredicted RBP13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 RPL31P62899 125 aaKnown RBP13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 GFOD2Q3B7J2 385 aa13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 ARSJQ5FYB0 599 aaPredicted RBP13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 TEX30Q5JUR7 227 aa13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 CASC10Q5T4H9 136 aa13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 CD177Q8N6Q3 437 aa13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 OR4M1Q8NGD0 313 aa13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 FOXRED1Q96CU9 486 aaPredicted RBP13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 RNF170Q96K19 258 aa13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 KRCC1Q9NPI7 259 aaPredicted RBP13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 ABCB10Q9NRK6 738 aa13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 USE1Q9NZ43 259 aa13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 TBL2Q9Y4P3 447 aaKnown RBP13.74□□□□□ -0.21
UBE2D4-209ENST00000454428 DSCAML1Q8TD84 2053 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 ZNF593O00488 134 aaPredicted RBP13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 NME4O00746 187 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 EDF1O60869 148 aaKnown RBP13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 MTRF1O75570 445 aaKnown RBP13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 CST4P01036 141 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 ALDOBP05062 364 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 ARG1P05089 322 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 NCK1P16333 377 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 CAPZA1P52907 286 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 GRB2P62993 217 aaKnown RBP13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 ZNF626Q68DY1 528 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 KCTD8Q6ZWB6 473 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 THAP5Q7Z6K1 395 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 CENPVQ7Z7K6 275 aaPredicted RBP13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 LINC00471Q8N535 108 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 FAM86B1Q8N7N1 296 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 OR2T4Q8NH00 348 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 LYZL4Q96KX0 146 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 CHID1Q9BWS9 393 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 OR51I2Q9H344 312 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 SAR1AQ9NR31 198 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 DNAJC27Q9NZQ0 273 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 CD300AQ9UGN4 299 aa13.73□□□□□ -0.21
UBE2D4-209ENST00000454428 C17orf98A8MV24 154 aa13.72□□□□□ -0.21
UBE2D4-209ENST00000454428 FAM90A22PA8MWA6 464 aa13.72□□□□□ -0.21
UBE2D4-209ENST00000454428 F2RL2O00254 374 aa13.72□□□□□ -0.21
UBE2D4-209ENST00000454428 CFL1P23528 166 aaKnown RBP13.72□□□□□ -0.21
UBE2D4-209ENST00000454428 GSSP48637 474 aa13.72□□□□□ -0.21
UBE2D4-209ENST00000454428 GPM6AP51674 278 aa13.72□□□□□ -0.21
UBE2D4-209ENST00000454428 DCTN2Q13561 401 aaKnown RBP13.72□□□□□ -0.21
UBE2D4-209ENST00000454428 OR52H1Q8NGJ2 320 aa13.72□□□□□ -0.21
UBE2D4-209ENST00000454428 DYDC1Q8WWB3 177 aa13.72□□□□□ -0.21
UBE2D4-209ENST00000454428 RCN3Q96D15 328 aa13.72□□□□□ -0.21
UBE2D4-209ENST00000454428 AMELYQ99218 206 aa13.72□□□□□ -0.21
UBE2D4-209ENST00000454428 SIKE1Q9BRV8 207 aa13.72□□□□□ -0.21
UBE2D4-209ENST00000454428 KRTAP17-1Q9BYP8 105 aa13.72□□□□□ -0.21
UBE2D4-209ENST00000454428 FAM32AQ9Y421 112 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms