RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 HHLA2Q9UM44 414 aa23.51■■□□□ 1.35
SMARCC1-203ENST00000454240 TPRKBQ9Y3C4 175 aa23.51■■□□□ 1.35
SMARCC1-203ENST00000454240 TRBV2A0A0J9YWF9 115 aa23.5■■□□□ 1.35
SMARCC1-203ENST00000454240 ISPDA4D126 451 aa23.5■■□□□ 1.35
SMARCC1-203ENST00000454240 CD5LO43866 347 aa23.5■■□□□ 1.35
SMARCC1-203ENST00000454240 LALBAP00709 142 aa23.5■■□□□ 1.35
SMARCC1-203ENST00000454240 RPSAP08865 295 aaKnown RBP23.5■■□□□ 1.35
SMARCC1-203ENST00000454240 GNG3P63215 75 aa23.5■■□□□ 1.35
SMARCC1-203ENST00000454240 TMEM155Q4W5P6 130 aa23.5■■□□□ 1.35
SMARCC1-203ENST00000454240 DMRTC1Q5HYR2 192 aa23.5■■□□□ 1.35
SMARCC1-203ENST00000454240 PLCXD3Q63HM9 321 aa23.5■■□□□ 1.35
SMARCC1-203ENST00000454240 CYB5R2Q6BCY4 276 aa23.5■■□□□ 1.35
SMARCC1-203ENST00000454240 OR10AC1Q8NH08 325 aa23.5■■□□□ 1.35
SMARCC1-203ENST00000454240 OR5AK2Q8NH90 309 aa23.5■■□□□ 1.35
SMARCC1-203ENST00000454240 MYDGFQ969H8 173 aa23.5■■□□□ 1.35
SMARCC1-203ENST00000454240 DUSP21Q9H596 190 aa23.5■■□□□ 1.35
SMARCC1-203ENST00000454240 GPR173Q9NS66 373 aa23.5■■□□□ 1.35
SMARCC1-203ENST00000454240 PPIAL4EA0A075B759 164 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 OR5B21A6NL26 309 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 ZNF732B4DXR9 585 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 PPIAL4DF5H284 164 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 OGG1O15527 345 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 LHBP01229 141 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 PPIAL4FP0DN26 164 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 CFHR2P36980 270 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 GPM6AP51674 278 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 CDK5R1Q15078 307 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 FAM201AQ5SY85 155 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 KCTD8Q6ZWB6 473 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 NANOGP1Q8N7R0 232 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 OR51A4Q8NGJ6 313 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 SGCDQ92629 289 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 MSI2Q96DH6 328 aaKnown RBP23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 GAL3ST1Q99999 423 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 PDCD1LG2Q9BQ51 273 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 COMMD4Q9H0A8 199 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 TMEM165Q9HC07 324 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 PPIAL4AQ9Y536 164 aa23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 SIRT4Q9Y6E7 314 aaPredicted RBP23.49■■□□□ 1.35
SMARCC1-203ENST00000454240 ANKRD61A6NGH8 418 aa23.48■■□□□ 1.35
SMARCC1-203ENST00000454240 CDIPTO14735 213 aa23.48■■□□□ 1.35
SMARCC1-203ENST00000454240 DENRO43583 198 aaKnown RBP23.48■■□□□ 1.35
SMARCC1-203ENST00000454240 ZNF205O95201 554 aa23.48■■□□□ 1.35
SMARCC1-203ENST00000454240 IGHV2-5P01817 119 aa23.48■■□□□ 1.35
SMARCC1-203ENST00000454240 CRHBPP24387 322 aa23.48■■□□□ 1.35
SMARCC1-203ENST00000454240 MDH2P40926 338 aaKnown RBP23.48■■□□□ 1.35
SMARCC1-203ENST00000454240 WDR82Q6UXN9 313 aa23.48■■□□□ 1.35
SMARCC1-203ENST00000454240 GCSAMQ8N6F7 178 aa23.48■■□□□ 1.35
SMARCC1-203ENST00000454240 SCCPDHQ8NBX0 429 aa23.48■■□□□ 1.35
SMARCC1-203ENST00000454240 RPL3LQ92901 407 aaKnown RBP23.48■■□□□ 1.35
SMARCC1-203ENST00000454240 ADAT3Q96EY9 351 aaPredicted RBP23.48■■□□□ 1.35
SMARCC1-203ENST00000454240 CDCA4Q9BXL8 241 aa23.48■■□□□ 1.35
SMARCC1-203ENST00000454240 CHST5Q9GZS9 411 aa23.48■■□□□ 1.35
SMARCC1-203ENST00000454240 OR51I2Q9H344 312 aa23.48■■□□□ 1.35
SMARCC1-203ENST00000454240 ZNF665Q9H7R5 613 aa23.48■■□□□ 1.35
SMARCC1-203ENST00000454240 MALRD1Q5VYJ5 2156 aa23.48■■□□□ 1.35
SMARCC1-203ENST00000454240 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP23.48■■□□□ 1.352e-14■■■■■ 109.7
SMARCC1-203ENST00000454240 TLN2Q9Y4G6 2542 aa23.47■■□□□ 1.35
SMARCC1-203ENST00000454240 hCG_1807616A0A1W2PRN6 198 aa23.47■■□□□ 1.35
SMARCC1-203ENST00000454240 HOXA4Q00056 320 aaPredicted RBP23.47■■□□□ 1.35
SMARCC1-203ENST00000454240 UBE2V2Q15819 145 aa23.47■■□□□ 1.35
SMARCC1-203ENST00000454240 MUC20Q8N307 709 aaPredicted RBP23.47■■□□□ 1.35
SMARCC1-203ENST00000454240 SPICQ8N5J4 248 aa23.47■■□□□ 1.35
SMARCC1-203ENST00000454240 PP6455Q8WZ26 134 aa23.47■■□□□ 1.35
SMARCC1-203ENST00000454240 FGGYQ96C11 551 aa23.47■■□□□ 1.35
SMARCC1-203ENST00000454240 RAB39BQ96DA2 213 aa23.47■■□□□ 1.35
SMARCC1-203ENST00000454240 METTL17Q9H7H0 456 aaPredicted RBP23.47■■□□□ 1.35
SMARCC1-203ENST00000454240 TRIM36Q9NQ86 728 aa23.47■■□□□ 1.35
SMARCC1-203ENST00000454240 ERVK-18Q9QC07 812 aa23.47■■□□□ 1.35
SMARCC1-203ENST00000454240 ERGIC3Q9Y282 383 aa23.47■■□□□ 1.35
SMARCC1-203ENST00000454240 MYL12BO14950 172 aa23.46■■□□□ 1.35
SMARCC1-203ENST00000454240 WNT4P56705 351 aa23.46■■□□□ 1.35
SMARCC1-203ENST00000454240 ZNF404Q494X3 552 aa23.46■■□□□ 1.35
SMARCC1-203ENST00000454240 RBM48Q5RL73 367 aaKnown RBP23.46■■□□□ 1.35
SMARCC1-203ENST00000454240 Q71RC1 249 aaPredicted RBP23.46■■□□□ 1.35
SMARCC1-203ENST00000454240 RASSF4Q9H2L5 321 aa23.46■■□□□ 1.35
SMARCC1-203ENST00000454240 Q9H521 79 aa23.46■■□□□ 1.35
SMARCC1-203ENST00000454240 PQLC2LA1A4F0 135 aa23.45■■□□□ 1.34
SMARCC1-203ENST00000454240 FAM157AC9JC47 383 aa23.45■■□□□ 1.34
SMARCC1-203ENST00000454240 GATBO75879 557 aaKnown RBP23.45■■□□□ 1.34
SMARCC1-203ENST00000454240 SERPINA3P01011 423 aa23.45■■□□□ 1.34
SMARCC1-203ENST00000454240 DMKNQ6E0U4 476 aaPredicted RBP23.45■■□□□ 1.34
SMARCC1-203ENST00000454240 LINC01356Q8N9X3 169 aa23.45■■□□□ 1.34
SMARCC1-203ENST00000454240 OR13C3Q8NGS6 347 aa23.45■■□□□ 1.34
SMARCC1-203ENST00000454240 OR10Z1Q8NGY1 313 aa23.45■■□□□ 1.34
SMARCC1-203ENST00000454240 LRRC29Q8WV35 223 aa23.45■■□□□ 1.34
SMARCC1-203ENST00000454240 SMIM19Q96E16 107 aa23.45■■□□□ 1.34
SMARCC1-203ENST00000454240 TECTBQ96PL2 329 aa23.45■■□□□ 1.34
SMARCC1-203ENST00000454240 PATZ1Q9HBE1 687 aaKnown RBP23.45■■□□□ 1.34
SMARCC1-203ENST00000454240 UBAP1Q9NZ09 502 aa23.45■■□□□ 1.34
SMARCC1-203ENST00000454240 DOC2BQ14184 412 aa23.44■■□□□ 1.34
SMARCC1-203ENST00000454240 IRF3Q14653 427 aa23.44■■□□□ 1.34
SMARCC1-203ENST00000454240 UTS2BQ765I0 119 aa23.44■■□□□ 1.34
SMARCC1-203ENST00000454240 C19orf18Q8NEA5 215 aa23.44■■□□□ 1.34
SMARCC1-203ENST00000454240 RGP1Q92546 391 aaPredicted RBP23.44■■□□□ 1.34
SMARCC1-203ENST00000454240 TMEM246Q9BRR3 403 aa23.44■■□□□ 1.34
SMARCC1-203ENST00000454240 B4DSR2 109 aa23.43■■□□□ 1.34
SMARCC1-203ENST00000454240 LGALS8O00214 317 aa23.43■■□□□ 1.34
SMARCC1-203ENST00000454240 ZNF16P17020 682 aaPredicted RBP23.43■■□□□ 1.34
SMARCC1-203ENST00000454240 ZNF20P17024 532 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms