RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 DIMT1Q9UNQ2 313 aaKnown RBP16.72■□□□□ 0.27
COL9A3-202ENST00000452372 PHF1O43189 567 aaPredicted RBP16.71■□□□□ 0.27
COL9A3-202ENST00000452372 NRASP01111 189 aa16.71■□□□□ 0.27
COL9A3-202ENST00000452372 LHBP01229 141 aa16.71■□□□□ 0.27
COL9A3-202ENST00000452372 ISG15P05161 165 aa16.71■□□□□ 0.27
COL9A3-202ENST00000452372 ZNF12P17014 697 aa16.71■□□□□ 0.27
COL9A3-202ENST00000452372 CEP78Q5JTW2 689 aa16.71■□□□□ 0.27
COL9A3-202ENST00000452372 CLVS2Q5SYC1 327 aa16.71■□□□□ 0.27
COL9A3-202ENST00000452372 MOB3CQ70IA8 216 aa16.71■□□□□ 0.27
COL9A3-202ENST00000452372 RDH10Q8IZV5 341 aa16.71■□□□□ 0.27
COL9A3-202ENST00000452372 OR5A2Q8NGI9 324 aa16.71■□□□□ 0.27
COL9A3-202ENST00000452372 TMEM80Q96HE8 168 aa16.71■□□□□ 0.27
COL9A3-202ENST00000452372 KCNS2Q9ULS6 477 aa16.71■□□□□ 0.27
COL9A3-202ENST00000452372 WNK2Q9Y3S1 2297 aa16.71■□□□□ 0.27
COL9A3-202ENST00000452372 LOC107986453A0A1B0GWG9 222 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 hCG_1807616A0A1W2PRN6 198 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 OR4C45A6NMZ5 311 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 CDIPTO14735 213 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 MSMBP08118 114 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 PIPP12273 146 aaPredicted RBP16.7■□□□□ 0.26
COL9A3-202ENST00000452372 CPT2P23786 658 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 CFHR2P36980 270 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 ETV1P50549 477 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 DVL1P1P54792 670 aaPredicted RBP16.7■□□□□ 0.26
COL9A3-202ENST00000452372 GNG3P63215 75 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 CSNK2BP67870 215 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 ALKBH1Q13686 389 aaKnown RBP16.7■□□□□ 0.26
COL9A3-202ENST00000452372 ZNF404Q494X3 552 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 PLCXD3Q63HM9 321 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 WDR82Q6UXN9 313 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 KCTD8Q6ZWB6 473 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 GCSAMQ8N6F7 178 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 OR51F2Q8NH61 342 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 HAVCR2Q8TDQ0 301 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 TMEM246Q9BRR3 403 aa16.7■□□□□ 0.26
COL9A3-202ENST00000452372 CNOT2Q9NZN8 540 aaKnown RBP16.7■□□□□ 0.26
COL9A3-202ENST00000452372 CAB39Q9Y376 341 aaPredicted RBP16.7■□□□□ 0.26
COL9A3-202ENST00000452372 EXOSC1Q9Y3B2 195 aaKnown RBP16.7■□□□□ 0.26
COL9A3-202ENST00000452372 EFCAB10A6NFE3 127 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 A6NIN4 97 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 OR5B21A6NL26 309 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 CEACAM18A8MTB9 384 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 ZNF732B4DXR9 585 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 F5H0A9 414 aaPredicted RBP16.69■□□□□ 0.26
COL9A3-202ENST00000452372 H3BSH0 61 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 LGALS8O00214 317 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 XPNPEP2O43895 674 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 MYL12AP19105 171 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 GPM6AP51674 278 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 GBX2P52951 348 aaPredicted RBP16.69■□□□□ 0.26
COL9A3-202ENST00000452372 ST3GAL4Q11206 333 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 BOLLQ8N9W6 283 aaKnown RBP16.69■□□□□ 0.26
COL9A3-202ENST00000452372 SCCPDHQ8NBX0 429 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 BPIFB6Q8NFQ5 453 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 TMEM158Q8WZ71 300 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 TMEM186Q96B77 213 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 C10orf35Q96D05 121 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 SHARPINQ9H0F6 387 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 METTL17Q9H7H0 456 aaPredicted RBP16.69■□□□□ 0.26
COL9A3-202ENST00000452372 PLEKHA1Q9HB21 404 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 LPAR2Q9HBW0 351 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 LPAR3Q9UBY5 353 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 MIOXQ9UGB7 285 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 PSORS1C1Q9UIG5 152 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 ARHGAP32A7KAX9 2087 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 DOCK11Q5JSL3 2073 aa16.69■□□□□ 0.26
COL9A3-202ENST00000452372 ANK2Q01484 3957 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 E9PI62 339 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 PLPP2O43688 288 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 WNT2P09544 360 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 TGM4P49221 684 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 HOXA4Q00056 320 aaPredicted RBP16.68■□□□□ 0.26
COL9A3-202ENST00000452372 MED21Q13503 144 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 DMRTC1Q5HYR2 192 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 FAM120AOSQ5T036 256 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 SFRP4Q6FHJ7 346 aaPredicted RBP16.68■□□□□ 0.26
COL9A3-202ENST00000452372 IZUMO2Q6UXV1 221 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 TMPRSS11AQ6ZMR5 421 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 IL17RELQ6ZVW7 336 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 GLCCI1Q86VQ1 547 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 C19orf18Q8NEA5 215 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 DEFB108BQ8NET1 73 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 OR10Z1Q8NGY1 313 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 LRRC29Q8WV35 223 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 RPL3LQ92901 407 aaKnown RBP16.68■□□□□ 0.26
COL9A3-202ENST00000452372 OR51I2Q9H344 312 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 TRIM36Q9NQ86 728 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 GPR173Q9NS66 373 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 HIF1ANQ9NWT6 349 aa16.68■□□□□ 0.26
COL9A3-202ENST00000452372 CHCHD3Q9NX63 227 aaKnown RBP16.68■□□□□ 0.26
COL9A3-202ENST00000452372 TRAV20A0A0B4J274 112 aa16.67■□□□□ 0.26
COL9A3-202ENST00000452372 ANKRD61A6NGH8 418 aa16.67■□□□□ 0.26
COL9A3-202ENST00000452372 OOEPA6NGQ2 149 aa16.67■□□□□ 0.26
COL9A3-202ENST00000452372 RPSAP08865 295 aaKnown RBP16.67■□□□□ 0.26
COL9A3-202ENST00000452372 CD80P33681 288 aa16.67■□□□□ 0.26
COL9A3-202ENST00000452372 HSPA13P48723 471 aa16.67■□□□□ 0.26
COL9A3-202ENST00000452372 KCNJ8Q15842 424 aa16.67■□□□□ 0.26
COL9A3-202ENST00000452372 C6orf141Q5SZD1 244 aa16.67■□□□□ 0.26
COL9A3-202ENST00000452372 DCDC5Q6ZRR9 648 aa16.67■□□□□ 0.26
COL9A3-202ENST00000452372 ZNF676Q8N7Q3 588 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms