RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 A0A1B0GW55 424 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 TTRP02766 147 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 DUX4L2P0CJ85 424 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 DUX4L3P0CJ86 424 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 DUX4L4P0CJ87 422 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 DUX4L5P0CJ88 424 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 DUX4L6P0CJ89 424 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 DUX4L7P0CJ90 424 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 CXCR4P61073 352 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 GNG3P63215 75 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 MFGE8Q08431 387 aaPredicted RBP16.02■□□□□ 0.16
USP40-207ENST00000450940 RIPPLY1Q0D2K3 151 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 FOXL1Q12952 345 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 PDCD1Q15116 288 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 DUX4L9Q6RFH8 374 aaPredicted RBP16.02■□□□□ 0.16
USP40-207ENST00000450940 BRD3OSQ6XYD6 125 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 Q6ZSR3 168 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 SLC35F2Q8IXU6 374 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 OR5A2Q8NGI9 324 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 PPP1R14AQ96A00 147 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 HIST1H2AAQ96QV6 131 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 IL4I1Q96RQ9 567 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 APOL4Q9BPW4 351 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 OSBPL10Q9BXB5 764 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 GABARAPL3Q9BY60 117 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 WDR13Q9H1Z4 485 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 CNTD2Q9H8S5 307 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 DUX4Q9UBX2 424 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 IKZF2Q9UKS7 526 aa16.02■□□□□ 0.16
USP40-207ENST00000450940 POLR2IP36954 125 aaKnown RBP16.01■□□□□ 0.15
USP40-207ENST00000450940 GPM6AP51674 278 aa16.01■□□□□ 0.15
USP40-207ENST00000450940 ACTR3P61158 418 aa16.01■□□□□ 0.15
USP40-207ENST00000450940 EGR3Q06889 387 aa16.01■□□□□ 0.15
USP40-207ENST00000450940 DEFB112Q30KQ8 113 aa16.01■□□□□ 0.15
USP40-207ENST00000450940 METTL11BQ5VVY1 283 aa16.01■□□□□ 0.15
USP40-207ENST00000450940 ZNF788Q6ZQV5 615 aa16.01■□□□□ 0.15
USP40-207ENST00000450940 FGFRL1Q8N441 504 aa16.01■□□□□ 0.15
USP40-207ENST00000450940 FAM216BQ8N7L0 139 aa16.01■□□□□ 0.15
USP40-207ENST00000450940 ANGPTL6Q8NI99 470 aa16.01■□□□□ 0.15
USP40-207ENST00000450940 ST8SIA4Q92187 359 aa16.01■□□□□ 0.15
USP40-207ENST00000450940 MOB1AQ9H8S9 216 aa16.01■□□□□ 0.15
USP40-207ENST00000450940 NOX4Q9NPH5 578 aa16.01■□□□□ 0.15
USP40-207ENST00000450940 WARS2Q9UGM6 360 aaKnown RBP16.01■□□□□ 0.15
USP40-207ENST00000450940 OAZ3Q9UMX2 235 aa16.01■□□□□ 0.15
USP40-207ENST00000450940 KPTNQ9Y664 436 aa16.01■□□□□ 0.15
USP40-207ENST00000450940 R4GMQ9 66 aa16.01■□□□□ 0.15
USP40-207ENST00000450940 MDFIC2A0A1B0GVS7 189 aa16■□□□□ 0.15
USP40-207ENST00000450940 OR5B21A6NL26 309 aa16■□□□□ 0.15
USP40-207ENST00000450940 ZNF670-ZNF695F2Z2N8 137 aa16■□□□□ 0.15
USP40-207ENST00000450940 AKR7A2O43488 359 aa16■□□□□ 0.15
USP40-207ENST00000450940 NDUFB3O43676 98 aa16■□□□□ 0.15
USP40-207ENST00000450940 DHRS3O75911 302 aa16■□□□□ 0.15
USP40-207ENST00000450940 ARF6P62330 175 aa16■□□□□ 0.15
USP40-207ENST00000450940 CDONQ4KMG0 1287 aa16■□□□□ 0.15
USP40-207ENST00000450940 TMEM42Q69YG0 159 aa16■□□□□ 0.15
USP40-207ENST00000450940 Q6YL49 198 aa16■□□□□ 0.15
USP40-207ENST00000450940 KCTD8Q6ZWB6 473 aa16■□□□□ 0.15
USP40-207ENST00000450940 ELMOD2Q8IZ81 293 aa16■□□□□ 0.15
USP40-207ENST00000450940 OR5T2Q8NGG2 359 aa16■□□□□ 0.15
USP40-207ENST00000450940 C8orf46Q8TAG6 207 aa16■□□□□ 0.15
USP40-207ENST00000450940 MED30Q96HR3 178 aa16■□□□□ 0.15
USP40-207ENST00000450940 FAM71F1Q96KD3 344 aaPredicted RBP16■□□□□ 0.15
USP40-207ENST00000450940 TTTY10Q9BZA0 68 aa16■□□□□ 0.15
USP40-207ENST00000450940 SEMA6AQ9H2E6 1030 aa16■□□□□ 0.15
USP40-207ENST00000450940 MRM2Q9UI43 246 aaKnown RBP16■□□□□ 0.15
USP40-207ENST00000450940 IGHV1-69DA0A0B4J2H0 117 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 A0A1B0GTI1 187 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 ZNF732B4DXR9 585 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 LOC110117498-PIK3R3F6TDL0 507 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 MAGEB4O15481 346 aaPredicted RBP15.99■□□□□ 0.15
USP40-207ENST00000450940 MTRF1O75570 445 aaKnown RBP15.99■□□□□ 0.15
USP40-207ENST00000450940 RHBDL1O75783 438 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 CIB2O75838 187 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 IGHV1-69P01742 117 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 FAHP16930 419 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 HTR1FP30939 366 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 CEP78Q5JTW2 689 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 RUSC1-AS1Q66K80 236 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 THAP5Q7Z6K1 395 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 KIR3DL3Q8N743 410 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 OR8J1Q8NGP2 316 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 AQP3Q92482 292 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 GAFA1Q96PS6 74 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 DCTN5Q9BTE1 182 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 DNAJB11Q9UBS4 358 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 ENPP5Q9UJA9 477 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 OR52A1Q9UKL2 312 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 PIGLQ9Y2B2 252 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 V9GYS6 101 aa15.99■□□□□ 0.15
USP40-207ENST00000450940 DHRS7CA6NNS2 312 aa15.98■□□□□ 0.15
USP40-207ENST00000450940 SIGLEC5O15389 551 aa15.98■□□□□ 0.15
USP40-207ENST00000450940 HOXA3O43365 443 aaPredicted RBP15.98■□□□□ 0.15
USP40-207ENST00000450940 ACAA1P09110 424 aaPredicted RBP15.98■□□□□ 0.15
USP40-207ENST00000450940 OR2T7P0C7T2 308 aa15.98■□□□□ 0.15
USP40-207ENST00000450940 TMED1Q13445 227 aa15.98■□□□□ 0.15
USP40-207ENST00000450940 LRRC10Q5BKY1 277 aa15.98■□□□□ 0.15
USP40-207ENST00000450940 ZNF684Q5T5D7 378 aa15.98■□□□□ 0.15
USP40-207ENST00000450940 C16orf87Q6PH81 154 aa15.98■□□□□ 0.15
USP40-207ENST00000450940 MOB3CQ70IA8 216 aa15.98■□□□□ 0.15
USP40-207ENST00000450940 COMMD2Q86X83 199 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms