RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 PRSS45Q7RTY3 260 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 COMMD2Q86X83 199 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 CCDC54Q8NEL0 328 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 OR8B12Q8NGG6 310 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 ITFG2Q969R8 447 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 SMIM19Q96E16 107 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 LPAR2Q9HBW0 351 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 NKIRAS2Q9NYR9 191 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 FRRS1LQ9P0K9 344 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 PEX16Q9Y5Y5 336 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 IGHV1-69-2A0A0G2JMI3 117 aa14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 ZSCAN5BA6NJL1 495 aa14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 FAM157AC9JC47 383 aa14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 PLPP2O43688 288 aa14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 MTRF1O75570 445 aaKnown RBP14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 LALBAP00709 142 aa14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 CPEP16870 476 aa14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 CRYBB2P43320 205 aa14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 NANOS3P60323 173 aaKnown RBP14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 MRPS11P82912 194 aaKnown RBP14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 SRSF2Q01130 221 aaKnown RBP14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 SLC3A1Q07837 685 aa14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 HNRNPA0Q13151 305 aaKnown RBP14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 TPBGQ13641 420 aa14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 TRAM1Q15629 374 aa14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 MBNL2Q5VZF2 373 aaKnown RBP14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 DMKNQ6E0U4 476 aaPredicted RBP14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 MRPL21Q7Z2W9 205 aaKnown RBP14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 PRSS35Q8N3Z0 413 aa14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 ZFP41Q8N8Y5 198 aa14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 SLIRPQ9GZT3 109 aaKnown RBP14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 MSL2Q9HCI7 577 aa14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 AKIP1Q9NQ31 210 aa14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 NDUFB11Q9NX14 153 aa14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 SLC22A13Q9Y226 551 aa14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 STARD10Q9Y365 291 aa14.44□□□□□ -0.1
PRPF40A-204ENST00000450303 PNMA8CA0A1B0GUJ8 204 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 A0A1B0GVI7 797 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 PLSCR5A0PG75 271 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 OR4C45A6NMZ5 311 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 PHF1O43189 567 aaPredicted RBP14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 TTRP02766 147 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 ISG15P05161 165 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 HNF1AP20823 631 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 KIR3DL2P43630 455 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 RGS21Q2M5E4 152 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 GFOD2Q3B7J2 385 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 SNAI3Q3KNW1 292 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 SPRNQ5BIV9 151 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 MS4A15Q8N5U1 240 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 MINDY2Q8NBR6 621 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 RPS4Y2Q8TD47 263 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 C1orf159Q96HA4 380 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 REEP6Q96HR9 211 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 SAP30LQ9HAJ7 183 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 PTTG3PQ9NZH4 202 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 GSTK1Q9Y2Q3 226 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 ZNF281Q9Y2X9 895 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 DNHD1Q96M86 4753 aa14.43□□□□□ -0.1
PRPF40A-204ENST00000450303 TIMM8AO60220 97 aaPredicted RBP14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 SERPINA3P01011 423 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 SELEP16581 610 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 RBMXP38159 391 aaKnown RBP14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 LMO4P61968 165 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 PSG7Q13046 419 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 SSX1Q16384 188 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 ODF4Q2M2E3 257 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 YIF1BQ5BJH7 314 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 GLYATL3Q5SZD4 288 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 LIPKQ5VXJ0 399 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 PGAP1Q75T13 922 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 DOK3Q7L591 496 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 OR51E1Q8TCB6 317 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 CCL17Q92583 94 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 THRSPQ92748 146 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 GHSRQ92847 366 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 PPP1R14AQ96A00 147 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 RNF166Q96A37 237 aaPredicted RBP14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 SGK3Q96BR1 496 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 C6orf62Q9GZU0 229 aaPredicted RBP14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 HHLA2Q9UM44 414 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 SIRT4Q9Y6E7 314 aaPredicted RBP14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 MXRA5Q9NR99 2828 aa14.42□□□□□ -0.1
PRPF40A-204ENST00000450303 GGT3PA6NGU5 568 aa14.41□□□□□ -0.1
PRPF40A-204ENST00000450303 B4DSR2 109 aa14.41□□□□□ -0.1
PRPF40A-204ENST00000450303 J3QRK9 145 aa14.41□□□□□ -0.1
PRPF40A-204ENST00000450303 P2RY10O00398 339 aa14.41□□□□□ -0.1
PRPF40A-204ENST00000450303 SYT7O43581 403 aa14.41□□□□□ -0.1
PRPF40A-204ENST00000450303 ZFPL1O95159 310 aa14.41□□□□□ -0.1
PRPF40A-204ENST00000450303 DVL1P1P54792 670 aaPredicted RBP14.41□□□□□ -0.1
PRPF40A-204ENST00000450303 HFEQ30201 348 aa14.41□□□□□ -0.1
PRPF40A-204ENST00000450303 PHC2Q8IXK0 858 aa14.41□□□□□ -0.1
PRPF40A-204ENST00000450303 GPR148Q8TDV2 347 aa14.41□□□□□ -0.1
PRPF40A-204ENST00000450303 SPSB4Q96A44 273 aa14.41□□□□□ -0.1
PRPF40A-204ENST00000450303 CMBLQ96DG6 245 aa14.41□□□□□ -0.1
PRPF40A-204ENST00000450303 ELMOD3Q96FG2 381 aa14.41□□□□□ -0.1
PRPF40A-204ENST00000450303 CEP19Q96LK0 163 aa14.41□□□□□ -0.1
PRPF40A-204ENST00000450303 PDCD1LG2Q9BQ51 273 aa14.41□□□□□ -0.1
PRPF40A-204ENST00000450303 CENPOQ9BU64 300 aa14.41□□□□□ -0.1
PRPF40A-204ENST00000450303 NXF2Q9GZY0 626 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms