RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 PTX4Q96A99 478 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 SHDQ96IW2 340 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 C4orf45Q96LM5 186 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 PHF7Q9BWX1 381 aaPredicted RBP11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 PARD6AQ9NPB6 346 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 CUTCQ9NTM9 273 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 IGHV1OR15-9A0A0B4J2B8 117 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 CENPVL1A0A0U1RR11 272 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 RAB27BO00194 218 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 CTSBP07858 339 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 EMDP50402 254 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 OR51F2Q8NH61 342 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 DIRC2Q96SL1 478 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 LRRC61Q9BV99 259 aa11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 MRM2Q9UI43 246 aaKnown RBP11.95□□□□□ -0.5
SYNGAP1-204ENST00000449372 EFSO43281 561 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 AMBPP02760 352 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 FBXO45P0C2W1 286 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 PGA3P0DJD8 388 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 CSRP1P21291 193 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 EPHA1P21709 976 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 RPL29P47914 159 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 UBE2KP61086 200 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 PHF19Q5T6S3 580 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 TMEM268Q5VZI3 342 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 DCXRQ7Z4W1 244 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 ZNF321PQ8N8H1 164 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 RCBTB1Q8NDN9 531 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 CTHRC1Q96CG8 243 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 NKX3-1Q99801 234 aaPredicted RBP11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 FAM60AQ9NP50 221 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 SIAH2O43255 324 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 SCAF4O95104 1147 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 GCGP01275 180 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 DEGS2Q6QHC5 323 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 OR13C9Q8NGT0 318 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 RAB39BQ96DA2 213 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 GAL3ST2Q9H3Q3 398 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 ELOVL3Q9HB03 270 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 HRASLS2Q9NWW9 162 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 RAB22AQ9UL26 194 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 EML5Q05BV3 1969 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 A0A1W2PR77 199 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 GEMIN2O14893 280 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 MT-ATP6P00846 226 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 PGA4P0DJD7 388 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 PGA5P0DJD9 388 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 GABRR1P24046 479 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 ZNF74Q16587 644 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 RPUSD3Q6P087 351 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 ZNF573Q86YE8 665 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 TMEFF1Q8IYR6 380 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 ZNF679Q8IYX0 411 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 RNASE8Q8TDE3 154 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 LMF1Q96S06 567 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 FBXO34Q9NWN3 711 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 SEMA5BQ9P283 1151 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 SUSD2Q9UGT4 822 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 THADAQ6YHU6 1953 aa11.94□□□□□ -0.5
SYNGAP1-204ENST00000449372 A0A1B0GV50 99 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 ITGB1BP1O14713 200 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 STK17BO94768 372 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 CAMLGP49069 296 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 PAX5Q02548 391 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 KLHL24Q6TFL4 600 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 TMEM183AQ8IXX5 376 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 ZNF101Q8IZC7 436 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 KDM8Q8N371 416 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 FAM160A2Q8N612 972 aaPredicted RBP11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 PLPP5Q8NEB5 264 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 PDE7BQ9NP56 450 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 GLRX2Q9NS18 164 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 MYOTQ9UBF9 498 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 V9GYS6 101 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 CEP192Q8TEP8 1941 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 SCN2AQ99250 2005 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 GOLGA4Q13439 2230 aaKnown RBP11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 H3BQ15 152 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 ALOX5APP20292 161 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 CEBPGP53567 150 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 S100A10P60903 97 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 RPS4XP62701 263 aaKnown RBP11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 ANKRD9Q96BM1 317 aaPredicted RBP11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 OR8B4Q96RC9 309 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 FRRS1LQ9P0K9 344 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 TDRD6O60522 2096 aaKnown RBP11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 UPK3AO75631 287 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 JTBO76095 146 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 OR4A8P0C604 315 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 UCP2P55851 309 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 TLE4Q04727 773 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 RAB32Q13637 225 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 SLC17A1Q14916 467 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 C17orf82Q86X59 251 aaPredicted RBP11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 CHST4Q8NCG5 386 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 FAM174AQ8TBP5 190 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 TAAR8Q969N4 342 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms