RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 AANATQ16613 207 aa10.87□□□□□ -0.67
HMGB3-204ENST00000448905 PRSS45Q7RTY3 260 aa10.87□□□□□ -0.67
HMGB3-204ENST00000448905 REC114Q7Z4M0 266 aa10.87□□□□□ -0.67
HMGB3-204ENST00000448905 ZDHHC23Q8IYP9 409 aa10.87□□□□□ -0.67
HMGB3-204ENST00000448905 ANGPTL6Q8NI99 470 aa10.87□□□□□ -0.67
HMGB3-204ENST00000448905 FAM81AQ8TBF8 368 aa10.87□□□□□ -0.67
HMGB3-204ENST00000448905 TEX47Q8TBZ9 253 aa10.87□□□□□ -0.67
HMGB3-204ENST00000448905 DGCR6LQ9BY27 220 aa10.87□□□□□ -0.67
HMGB3-204ENST00000448905 FAM107BQ9H098 131 aa10.87□□□□□ -0.67
HMGB3-204ENST00000448905 MEGF9Q9H1U4 602 aa10.87□□□□□ -0.67
HMGB3-204ENST00000448905 WDR13Q9H1Z4 485 aa10.87□□□□□ -0.67
HMGB3-204ENST00000448905 RASL12Q9NYN1 266 aa10.87□□□□□ -0.67
HMGB3-204ENST00000448905 ACTR3BQ9P1U1 418 aa10.87□□□□□ -0.67
HMGB3-204ENST00000448905 TAGLN3Q9UI15 199 aa10.87□□□□□ -0.67
HMGB3-204ENST00000448905 H3BUI4 141 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 SOX14O95416 240 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 AMY2BP19961 511 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 CAPZA1P52907 286 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 PRB3Q04118 309 aaPredicted RBP10.86□□□□□ -0.67
HMGB3-204ENST00000448905 EMX1Q04741 257 aaPredicted RBP10.86□□□□□ -0.67
HMGB3-204ENST00000448905 KLRD1Q13241 179 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 GK3PQ14409 553 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 DGUOKQ16854 277 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 FAM98BQ52LJ0 330 aaKnown RBP10.86□□□□□ -0.67
HMGB3-204ENST00000448905 LINC01590Q5TEZ4 76 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 CD300LDQ6UXZ3 194 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 CYP2R1Q6VVX0 501 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 LIAT1Q6ZQX7 453 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 DEFB107AQ8IZN7 70 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 OR4Q3Q8NH05 313 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 PPP1R14AQ96A00 147 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 GAFA1Q96PS6 74 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 TEX12Q9BXU0 123 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 NPFFR1Q9GZQ6 430 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 OR51V1Q9H2C8 321 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 MAGIXQ9H6Y5 334 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 RANBP3Q9H6Z4 567 aaPredicted RBP10.86□□□□□ -0.67
HMGB3-204ENST00000448905 PPP1R3EQ9H7J1 279 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 ARMC1Q9NVT9 282 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 ZNF319Q9P2F9 582 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 ZNF281Q9Y2X9 895 aa10.86□□□□□ -0.67
HMGB3-204ENST00000448905 SAMHD1Q9Y3Z3 626 aaKnown RBP10.86□□□□□ -0.67
HMGB3-204ENST00000448905 ACOD1A6NK06 481 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 FAM183AA6NL82 134 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 PRR23D1E9PI22 279 aaPredicted RBP10.85□□□□□ -0.67
HMGB3-204ENST00000448905 GSC2O15499 205 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 ANGPTL7O43827 346 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 SNX3O60493 162 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 PRR23D2P0DMB1 279 aaPredicted RBP10.85□□□□□ -0.67
HMGB3-204ENST00000448905 GPM6AP51674 278 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 GNG3P63215 75 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 LRRC75BQ2VPJ9 315 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 KLHL12Q53G59 568 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 OR2T5Q6IEZ7 315 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 THAP5Q7Z6K1 395 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 FAM185AQ8N0U4 392 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 PNKDQ8N490 385 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 ZNRF1Q8ND25 227 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 TMEM185AQ8NFB2 350 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 OR5A2Q8NGI9 324 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 OR2T29Q8NH02 315 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 OTOSQ8NHW6 89 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 U3KQV3 271 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 DOCK11Q5JSL3 2073 aa10.85□□□□□ -0.67
HMGB3-204ENST00000448905 ZNF732B4DXR9 585 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 SLC1A7O00341 560 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 XPNPEP2O43895 674 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 HMGN1P05114 100 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 PSG2P11465 335 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 SELLP14151 372 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 ATP6V1B1P15313 513 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 MAGEA2P43356 314 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 EFNB2P52799 333 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 DLX1P56177 255 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 PPP1R8Q12972 351 aaKnown RBP10.84□□□□□ -0.67
HMGB3-204ENST00000448905 LY6EQ16553 131 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 CEACAM21Q3KPI0 293 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 KCTD18Q6PI47 426 aaPredicted RBP10.84□□□□□ -0.67
HMGB3-204ENST00000448905 KRT77Q7Z794 578 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 DHFR2Q86XF0 187 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 ARHGAP24Q8N264 748 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 OR4S1Q8NGB4 309 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 PPP1R35Q8TAP8 253 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 C1orf21Q9H246 121 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 OR51I2Q9H344 312 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 MUC13Q9H3R2 512 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 YY1AP1Q9H869 796 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 MED20Q9H944 212 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 ZNF556Q9HAH1 456 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 ZNF446Q9NWS9 450 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 LAMP5Q9UJQ1 280 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 LRP12Q9Y561 859 aa10.84□□□□□ -0.67
HMGB3-204ENST00000448905 G3V4G9 280 aa10.83□□□□□ -0.68
HMGB3-204ENST00000448905 GNGT2O14610 69 aa10.83□□□□□ -0.68
HMGB3-204ENST00000448905 PEX14O75381 377 aa10.83□□□□□ -0.68
HMGB3-204ENST00000448905 DCTN3O75935 186 aa10.83□□□□□ -0.68
HMGB3-204ENST00000448905 ALX3O95076 343 aa10.83□□□□□ -0.68
HMGB3-204ENST00000448905 VSIG10L2P0DP72 767 aa10.83□□□□□ -0.68
HMGB3-204ENST00000448905 ACKR3P25106 362 aa10.83□□□□□ -0.68
HMGB3-204ENST00000448905 RPL31P62899 125 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms