RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 CATSPERDQ86XM0 798 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 OR5A2Q8NGI9 324 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 OR10Z1Q8NGY1 313 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 C22orf15Q8WYQ4 148 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 RORBQ92753 470 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 RNFT2Q96EX2 444 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 TECTBQ96PL2 329 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 NUDT16L1Q9BRJ7 211 aaKnown RBP10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 C19orf24Q9BVV8 132 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 WDR13Q9H1Z4 485 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 OR51I2Q9H344 312 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 MOB1AQ9H8S9 216 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 SMURF1Q9HCE7 757 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 KAAG1Q9UBP8 84 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 GMPPBQ9Y5P6 360 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 V9GYS6 101 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 A6NIN4 97 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 C22orf46C9J442 243 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 J3QRE1 110 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 NRASP01111 189 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 GABRB1P18505 474 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 GMFBP60983 142 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 GNG3P63215 75 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 ODF4Q2M2E3 257 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 TP53I3Q53FA7 332 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 ARMCX4Q5H9R4 360 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 Q6ZSR3 168 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 PRSS35Q8N3Z0 413 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 OR5T2Q8NGG2 359 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 OR14K1Q8NGZ2 314 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 ZNF418Q8TF45 676 aaPredicted RBP10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 RNF166Q96A37 237 aaPredicted RBP10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 CCL13Q99616 98 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 SLC6A7Q99884 636 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 FAM118AQ9NWS6 357 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 ENPP5Q9UJA9 477 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 NUP50Q9UKX7 468 aa10.58□□□□□ -0.72
PRPF40A-203ENST00000448428 LOC100130705A0A1B0GUX0 176 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 A0A1B0GW55 424 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 OR5B21A6NL26 309 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 DVL1O14640 695 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 TMPRSS2O15393 492 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 AKR7A2O43488 359 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 RHBDL1O75783 438 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 DUX4L2P0CJ85 424 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 DUX4L3P0CJ86 424 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 DUX4L4P0CJ87 422 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 DUX4L5P0CJ88 424 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 DUX4L6P0CJ89 424 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 DUX4L7P0CJ90 424 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 PPIAL4GP0DN37 164 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 AMY2BP19961 511 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 CCL1P22362 96 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 FPR2P25090 351 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 ISL1P61371 349 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 TUSC1Q2TAM9 212 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 WDR38Q5JTN6 314 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 CD276Q5ZPR3 534 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 PLCXD3Q63HM9 321 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 TMEM42Q69YG0 159 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 DUX4L9Q6RFH8 374 aaPredicted RBP10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 USP43Q70EL4 1123 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 DOK3Q7L591 496 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 ENTHD1Q8IYW4 607 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 BCL6BQ8N143 479 aaPredicted RBP10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 FGFRL1Q8N441 504 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 BPIFB2Q8N4F0 458 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 RHOXF1Q8NHV9 184 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 STMN2Q93045 179 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 UPRTQ96BW1 309 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 C12orf43Q96C57 262 aaKnown RBP10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 SNTG1Q9NSN8 517 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 DUX4Q9UBX2 424 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 ZNF69Q9UC07 566 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 GNG8Q9UK08 70 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 EXOGQ9Y2C4 368 aaKnown RBP10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 COL6A5A8TX70 2615 aa10.57□□□□□ -0.72
PRPF40A-203ENST00000448428 IGHV3OR16-10A0A075B7F0 116 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 DAPL1A0PJW8 107 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 H3BSH0 61 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 DLGAP1O14490 977 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 SLC16A6O15403 523 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 ENSAO43768 121 aaKnown RBP10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 TFF1P04155 84 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 IGHV4-38-2P0DP08 117 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 TGM4P49221 684 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 OR12D2P58182 307 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 HILS1P60008 231 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 FGF12P61328 243 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 CLVS2Q5SYC1 327 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 ATPAF1Q5TC12 328 aaPredicted RBP10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 STUMQ69YW2 141 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 BTN2A1Q7KYR7 527 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 SLC36A1Q7Z2H8 476 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 KCTD20Q7Z5Y7 419 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 ZNF671Q8TAW3 534 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 AQP3Q92482 292 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 LGALS12Q96DT0 336 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 SUCNR1Q9BXA5 334 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 GPR173Q9NS66 373 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms