RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 HAS2Q92819 552 aa8.34□□□□□ -1.07
SYNPO2-204ENST00000448416 OSGIN2Q9Y236 505 aa8.34□□□□□ -1.07
SYNPO2-204ENST00000448416 RHBDD3Q9Y3P4 386 aa8.34□□□□□ -1.07
SYNPO2-204ENST00000448416 TRPM6Q9BX84 2022 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 DHRS7CA6NNS2 312 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 A8MVM7 634 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 SLC16A7O60669 478 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 KAT7O95251 611 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 PRNPP04156 253 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 CST2P09228 141 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 QRFPP83859 136 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 PSG6Q00889 435 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 RAB35Q15286 201 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 TMEM176BQ3YBM2 270 aaPredicted RBP8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 GPR157Q5UAW9 335 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 P4HA3Q7Z4N8 544 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 GATSQ8NAP1 163 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 POC1BQ8TC44 478 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 COX14Q96I36 57 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 SYT3Q9BQG1 590 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 AK3Q9UIJ7 227 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 NRG2O14511 850 aaPredicted RBP8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 GPR75O95800 540 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 HSPB1P04792 205 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 HIST1H1DP16402 221 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 HSD11B1P28845 292 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 PEBP1P30086 187 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 CDK3Q00526 305 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF117Q03924 483 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 ICAM4Q14773 271 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 NNATQ16517 81 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF880Q6PDB4 577 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 SPSB3Q6PJ21 355 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 SLC16A14Q7RTX9 510 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 KREMEN2Q8NCW0 462 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 OR10A7Q8NGE5 316 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 HIST1H2AAQ96QV6 131 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 HSF4Q9ULV5 492 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 RFNGQ9Y644 331 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 CSF2RAP15509 400 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 PPM1AP35813 382 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 RAB38P57729 211 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 COL10A1Q03692 680 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 TAF9Q16594 264 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 PLAC9Q5JTB6 97 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 IGSF21Q96ID5 467 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 OR8D2Q9GZM6 311 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 TCFL5Q9UL49 500 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 R4GMQ9 66 aa8.33□□□□□ -1.08
SYNPO2-204ENST00000448416 FREM3P0C091 2139 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 SCGB1D1O95968 90 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 ASAH2BP0C7U1 165 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 POLR2HP52434 150 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 SNU13P55769 128 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 RPL23AP62750 156 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 PMS2P11Q13670 270 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF774Q6NX45 483 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 BTNL3Q6UXE8 466 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 TCEAL8Q8IYN2 117 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 TMEM52Q8NDY8 209 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 TMEM18Q96B42 140 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 SPACA5Q96QH8 159 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 LPAR5Q9H1C0 372 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 BANF2Q9H503 90 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 MRPL22Q9NWU5 206 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 SEMA5BQ9P283 1151 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 LRIT1Q9P2V4 623 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 SRPK3Q9UPE1 567 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 GAB2Q9UQC2 676 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 SPACA6W5XKT8 324 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 SERINC4A6NH21 518 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 TP53I11O14683 189 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 KLF8O95600 359 aaPredicted RBP8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 NOVA1P51513 510 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 RND2P52198 227 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 MGAT2Q10469 447 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 SAPCD1Q5SSQ6 148 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 C1orf140Q5VVS0 124 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 SULF2Q8IWU5 870 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 OR4C3Q8NH37 302 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF385AQ96PM9 386 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 GPR173Q9NS66 373 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 VAX2Q9UIW0 290 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 SLC5A6Q9Y289 635 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 TRBV24-1A0A075B6N3 115 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 NSG1A0A0A6YYJ2 146 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 FAM230AA0A1W2PPH8 454 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 CRTAPO75718 401 aaPredicted RBP8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 PNMTP11086 282 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 FGF5P12034 268 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 CST5P28325 142 aaPredicted RBP8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 LBX1P52954 281 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 RPS15AP62244 130 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF141Q15928 474 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF573Q86YE8 665 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 RHBDD1Q8TEB9 315 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 C8orf44Q96CB5 159 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 CYYR1Q96J86 154 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 CDH20Q9HBT6 801 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 PADI1Q9ULC6 663 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms