RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SLC17A4Q9Y2C5 497 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 NSG2Q9Y328 171 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 YLPM1P49750 1951 aaKnown RBP17.01■□□□□ 0.31
HMGA1-205ENST00000447654 A0A087WV62 115 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 SOX8P57073 446 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 SGCGQ13326 291 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 RASD2Q96D21 266 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 CHST11Q9NPF2 352 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 C1orf123Q9NWV4 160 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 CYP8B1Q9UNU6 501 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 A0A1W2PS29 197 aa17■□□□□ 0.31
HMGA1-205ENST00000447654 H0Y8X5 98 aa17■□□□□ 0.31
HMGA1-205ENST00000447654 ERI3O43414 337 aaKnown RBP17■□□□□ 0.31
HMGA1-205ENST00000447654 PEBP1P30086 187 aaKnown RBP17■□□□□ 0.31
HMGA1-205ENST00000447654 CDKN1BP46527 198 aa17■□□□□ 0.31
HMGA1-205ENST00000447654 GABRA4P48169 554 aa17■□□□□ 0.31
HMGA1-205ENST00000447654 RBX1P62877 108 aa17■□□□□ 0.31
HMGA1-205ENST00000447654 TFF2Q03403 129 aa17■□□□□ 0.31
HMGA1-205ENST00000447654 ZNF117Q03924 483 aa17■□□□□ 0.31
HMGA1-205ENST00000447654 PRDX1Q06830 199 aaKnown RBP17■□□□□ 0.31
HMGA1-205ENST00000447654 COL9A2Q14055 689 aaPredicted RBP17■□□□□ 0.31
HMGA1-205ENST00000447654 ADPRHL1Q8NDY3 354 aa17■□□□□ 0.31
HMGA1-205ENST00000447654 TMEM104Q8NE00 496 aa17■□□□□ 0.31
HMGA1-205ENST00000447654 OR5L2Q8NGL0 311 aa17■□□□□ 0.31
HMGA1-205ENST00000447654 FAM131CQ96AQ9 280 aa17■□□□□ 0.31
HMGA1-205ENST00000447654 CMBLQ96DG6 245 aa17■□□□□ 0.31
HMGA1-205ENST00000447654 HIPK2Q9H2X6 1198 aa17■□□□□ 0.31
HMGA1-205ENST00000447654 SRD5A3Q9H8P0 318 aa17■□□□□ 0.31
HMGA1-205ENST00000447654 COLQQ9Y215 455 aaPredicted RBP17■□□□□ 0.31
HMGA1-205ENST00000447654 GPR137BO60478 399 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 HLA-DRB3P79483 266 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 SPOCK1Q08629 439 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 ZNF506Q5JVG8 444 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 ASB5Q8WWX0 329 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 WIPF3A6NGB9 483 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 NTSR1P30989 418 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 PPP1CCP36873 323 aaKnown RBP16.99■□□□□ 0.31
HMGA1-205ENST00000447654 BCL6P41182 706 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 APOBEC1P41238 236 aaKnown RBP16.99■□□□□ 0.31
HMGA1-205ENST00000447654 CDKN2AP42771 156 aaKnown RBP16.99■□□□□ 0.31
HMGA1-205ENST00000447654 TNFRSF4P43489 277 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 RAB28P51157 221 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 CLDN6P56747 220 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 HSF1Q00613 529 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 KIRREL2Q6UWL6 708 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 RABEPKQ7Z6M1 372 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 COX18Q8N8Q8 333 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 GABRG3Q99928 467 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 RARRES2Q99969 163 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 RTBDNQ9BSG5 229 aaPredicted RBP16.99■□□□□ 0.31
HMGA1-205ENST00000447654 URM1Q9BTM9 101 aaKnown RBP16.99■□□□□ 0.31
HMGA1-205ENST00000447654 APOOQ9BUR5 198 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 CTDSP1Q9GZU7 261 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 FBLN5Q9UBX5 448 aa16.99■□□□□ 0.31
HMGA1-205ENST00000447654 GPR89AB7ZAQ6 455 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 TXNDC12O95881 172 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 CYB5R3P00387 301 aaPredicted RBP16.98■□□□□ 0.31
HMGA1-205ENST00000447654 GUSBP08236 651 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 GPR89BP0CG08 455 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 SERPINA2P20848 420 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 IAH1Q2TAA2 248 aaPredicted RBP16.98■□□□□ 0.31
HMGA1-205ENST00000447654 EMC4Q5J8M3 183 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 LYPD6Q86Y78 171 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 SGPP2Q8IWX5 399 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 TIMM29Q9BSF4 260 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 OR51B6Q9H340 312 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 H0YL77 283 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 CTSVO60911 334 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 LHFPL1Q86WI0 220 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 OR4X1Q8NH49 305 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 WFIKKN1Q96NZ8 548 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 OR8B4Q96RC9 309 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 SMIM3Q9BZL3 60 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 GSX1Q9H4S2 264 aaPredicted RBP16.98■□□□□ 0.31
HMGA1-205ENST00000447654 LPAR2Q9HBW0 351 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 TAS2R4Q9NYW5 299 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 SRPK3Q9UPE1 567 aa16.98■□□□□ 0.31
HMGA1-205ENST00000447654 A6NIZ1 184 aa16.97■□□□□ 0.31
HMGA1-205ENST00000447654 KLF8O95600 359 aaPredicted RBP16.97■□□□□ 0.31
HMGA1-205ENST00000447654 ACAA2P42765 397 aaKnown RBP16.97■□□□□ 0.31
HMGA1-205ENST00000447654 FHITP49789 147 aa16.97■□□□□ 0.31
HMGA1-205ENST00000447654 RND3P61587 244 aa16.97■□□□□ 0.31
HMGA1-205ENST00000447654 PLAURQ03405 335 aa16.97■□□□□ 0.31
HMGA1-205ENST00000447654 SLC17A1Q14916 467 aa16.97■□□□□ 0.31
HMGA1-205ENST00000447654 CDRT4Q8N9R6 151 aa16.97■□□□□ 0.31
HMGA1-205ENST00000447654 CHST4Q8NCG5 386 aa16.97■□□□□ 0.31
HMGA1-205ENST00000447654 SEMA6DQ8NFY4 1073 aa16.97■□□□□ 0.31
HMGA1-205ENST00000447654 CCL4L1Q8NHW4 92 aa16.97■□□□□ 0.31
HMGA1-205ENST00000447654 FNDC9Q8TBE3 224 aa16.97■□□□□ 0.31
HMGA1-205ENST00000447654 EMG1Q92979 244 aaKnown RBP16.97■□□□□ 0.31
HMGA1-205ENST00000447654 FGGYQ96C11 551 aa16.97■□□□□ 0.31
HMGA1-205ENST00000447654 C19orf53Q9UNZ5 99 aaPredicted RBP16.97■□□□□ 0.31
HMGA1-205ENST00000447654 EML5Q05BV3 1969 aa16.97■□□□□ 0.31
HMGA1-205ENST00000447654 BPNT1O95861 308 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 SLC35G6P0C7Q6 338 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 FGF5P12034 268 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 HOXB2P14652 356 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 CD82P27701 267 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 CTHP32929 405 aa16.96■□□□□ 0.31
HMGA1-205ENST00000447654 AADACL3Q5VUY0 350 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms