RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 TGFBR2P37173 567 aa11.93□□□□□ -0.5
SREBF1-207ENST00000447641 CD200P41217 278 aa11.93□□□□□ -0.5
SREBF1-207ENST00000447641 GATA4P43694 442 aa11.93□□□□□ -0.5
SREBF1-207ENST00000447641 MAB21L1Q13394 359 aa11.93□□□□□ -0.5
SREBF1-207ENST00000447641 CARTPTQ16568 116 aa11.93□□□□□ -0.5
SREBF1-207ENST00000447641 HFEQ30201 348 aa11.93□□□□□ -0.5
SREBF1-207ENST00000447641 FOXB2Q5VYV0 432 aa11.93□□□□□ -0.5
SREBF1-207ENST00000447641 FDX2Q6P4F2 183 aa11.93□□□□□ -0.5
SREBF1-207ENST00000447641 CATSPERDQ86XM0 798 aa11.93□□□□□ -0.5
SREBF1-207ENST00000447641 MAPK1IP1LQ8NDC0 245 aa11.93□□□□□ -0.5
SREBF1-207ENST00000447641 CSNK2A3Q8NEV1 391 aa11.93□□□□□ -0.5
SREBF1-207ENST00000447641 OR10AD1Q8NGE0 317 aa11.93□□□□□ -0.5
SREBF1-207ENST00000447641 SMIM19Q96E16 107 aa11.93□□□□□ -0.5
SREBF1-207ENST00000447641 SOX7Q9BT81 388 aa11.93□□□□□ -0.5
SREBF1-207ENST00000447641 MOB1AQ9H8S9 216 aa11.93□□□□□ -0.5
SREBF1-207ENST00000447641 GCM1Q9NP62 436 aa11.93□□□□□ -0.5
SREBF1-207ENST00000447641 EXOSC4Q9NPD3 245 aaKnown RBP11.93□□□□□ -0.5
SREBF1-207ENST00000447641 OR52A1Q9UKL2 312 aa11.93□□□□□ -0.5
SREBF1-207ENST00000447641 NOP16Q9Y3C1 178 aaKnown RBP11.93□□□□□ -0.5
SREBF1-207ENST00000447641 TRBV2A0A0J9YWF9 115 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 LOC100506127A0A0U1RQW1 187 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 A0A1B0GTI1 187 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 TRDV1A0A1B0GX56 115 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 TMEM212A6NML5 194 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 LOC110117498-PIK3R3F6TDL0 507 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 OGG1O15527 345 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 GATBO75879 557 aaKnown RBP11.92□□□□□ -0.5
SREBF1-207ENST00000447641 ARL6IP5O75915 188 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 RGS9O75916 674 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-207ENST00000447641 CST4P01036 141 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 GADD45AP24522 165 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 FGF9P31371 208 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-207ENST00000447641 RANBP1P43487 201 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 SRP9P49458 86 aaKnown RBP11.92□□□□□ -0.5
SREBF1-207ENST00000447641 CCR9P51686 369 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 OR12D2P58182 307 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 DGUOKQ16854 277 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 YIF1BQ5BJH7 314 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 SPERTQ8NA61 448 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 OR51E1Q8TCB6 317 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 KCTD7Q96MP8 289 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 TSC22D3Q99576 134 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 RHBDD3Q9Y3P4 386 aa11.92□□□□□ -0.5
SREBF1-207ENST00000447641 LOC100289279A0A1B0GTE1 492 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 ANKRD30BLA7E2S9 258 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 RNF212BA8MTL3 300 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 IFNL4K9M1U5 179 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 CCL1P22362 96 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 MYL9P24844 172 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 PMELP40967 661 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 GPR6P46095 362 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-207ENST00000447641 CDK5R1Q15078 307 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 OR8G1Q15617 311 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 SSX1Q16384 188 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 CTF1Q16619 201 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 ZNF181Q2M3W8 571 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 GFOD2Q3B7J2 385 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 TP53I3Q53FA7 332 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 BCL2L15Q5TBC7 163 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 DMKNQ6E0U4 476 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-207ENST00000447641 LINC00299Q6ZSB3 139 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 SLC16A12Q6ZSM3 486 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 CROCCP3Q8IVE0 287 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 PRSS35Q8N3Z0 413 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 CCL17Q92583 94 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 PELI1Q96FA3 418 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 C1orf159Q96HA4 380 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 CHCHD6Q9BRQ6 235 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 PPP1R3EQ9H7J1 279 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 ISG20L2Q9H9L3 353 aaKnown RBP11.91□□□□□ -0.5
SREBF1-207ENST00000447641 GPR84Q9NQS5 396 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 TMEM106BQ9NUM4 274 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 ACOXLQ9NUZ1 547 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 PPP1R3CQ9UQK1 317 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 SLC22A13Q9Y226 551 aa11.91□□□□□ -0.5
SREBF1-207ENST00000447641 ZNF879B4DU55 563 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 CLDN25C9JDP6 229 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 WNT9BO14905 357 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 PPIHO43447 177 aaKnown RBP11.9□□□□□ -0.5
SREBF1-207ENST00000447641 TMEM127O75204 238 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 RPP14O95059 124 aaKnown RBP11.9□□□□□ -0.5
SREBF1-207ENST00000447641 FSTL3O95633 263 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 MAP2K3P46734 347 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 SLC3A1Q07837 685 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 HNRNPA0Q13151 305 aaKnown RBP11.9□□□□□ -0.5
SREBF1-207ENST00000447641 ALKBH1Q13686 389 aaKnown RBP11.9□□□□□ -0.5
SREBF1-207ENST00000447641 TMEM249Q2WGJ8 235 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 ZBTB37Q5TC79 503 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 CD200R1LQ6Q8B3 271 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 OR2G2Q8NGZ5 317 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 OR5AK2Q8NH90 309 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 Q8TCH9 128 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 AP3S1Q92572 193 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 HPS1Q92902 700 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 ERGIC1Q969X5 290 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 ADAT1Q9BUB4 502 aaKnown RBP11.9□□□□□ -0.5
SREBF1-207ENST00000447641 SLITRK2Q9H156 845 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 DCAF16Q9NXF7 216 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 TREM2Q9NZC2 230 aa11.9□□□□□ -0.5
SREBF1-207ENST00000447641 ZNF281Q9Y2X9 895 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms