RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TMEM210A6NLX4 147 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.37□□□□□ -0.43
HDAC4-204ENST00000446876 J3QLW9 94 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 MTRF1O75570 445 aaKnown RBP12.37□□□□□ -0.43
HDAC4-204ENST00000446876 FSTL3O95633 263 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 NRASP01111 189 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 ZNF19P17023 458 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 CCL1P22362 96 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 NANOS3P60323 173 aaKnown RBP12.37□□□□□ -0.43
HDAC4-204ENST00000446876 GNB2P62879 340 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 ADARB1P78563 741 aaKnown RBP12.37□□□□□ -0.43
HDAC4-204ENST00000446876 SRSF2Q01130 221 aaKnown RBP12.37□□□□□ -0.43
HDAC4-204ENST00000446876 CEACAM21Q3KPI0 293 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 DOK3Q7L591 496 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 KRT74Q7RTS7 529 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 OR52I1Q8NGK6 324 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 OR2G2Q8NGZ5 317 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 HIST1H2AAQ96QV6 131 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 ALG8Q9BVK2 526 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 ISG20L2Q9H9L3 353 aaKnown RBP12.37□□□□□ -0.43
HDAC4-204ENST00000446876 RNPEPL1Q9HAU8 725 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 OR5V1Q9UGF6 321 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 PCDHGB1Q9Y5G3 927 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 TRAV38-1A0A0B4J264 116 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 A0A1B0GW55 424 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 TNFRSF13BO14836 293 aaPredicted RBP12.36□□□□□ -0.43
HDAC4-204ENST00000446876 AKR7A2O43488 359 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 ADAM20O43506 726 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 SYT7O43581 403 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 RHBDL1O75783 438 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 IGHA1P01876 353 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 TFF1P04155 84 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 DUX4L2P0CJ85 424 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 DUX4L3P0CJ86 424 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 DUX4L4P0CJ87 422 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 DUX4L5P0CJ88 424 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 DUX4L6P0CJ89 424 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 DUX4L7P0CJ90 424 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 GNG3P63215 75 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 CLVS2Q5SYC1 327 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 ZBTB37Q5TC79 503 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 TEX36Q5VZQ5 186 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 TMEM42Q69YG0 159 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 DUX4L9Q6RFH8 374 aaPredicted RBP12.36□□□□□ -0.43
HDAC4-204ENST00000446876 ZNF841Q6ZN19 808 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 Q6ZSR3 168 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 NLRC3Q7RTR2 1065 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 DHRSXQ8N5I4 330 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 PELI1Q96FA3 418 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 ZNF649Q9BS31 505 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 ADI1Q9BV57 179 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 WDR13Q9H1Z4 485 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 RASSF4Q9H2L5 321 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 OR51I2Q9H344 312 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 C7orf69Q9H7B7 122 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 SMURF1Q9HCE7 757 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 C8orf4Q9NR00 106 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 SNTG1Q9NSN8 517 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 ERVK13-1Q9NX77 482 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 FRRS1LQ9P0K9 344 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 DUX4Q9UBX2 424 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 OPN4Q9UHM6 478 aa12.36□□□□□ -0.43
HDAC4-204ENST00000446876 POLR3KQ9Y2Y1 108 aaPredicted RBP12.36□□□□□ -0.43
HDAC4-204ENST00000446876 RPL36Q9Y3U8 105 aaKnown RBP12.36□□□□□ -0.43
HDAC4-204ENST00000446876 SRRM5B3KS81 715 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 J3QLI3 93 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 FCN3O75636 299 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 FADS2O95864 444 aaKnown RBP12.35□□□□□ -0.43
HDAC4-204ENST00000446876 IFNA2P01563 188 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 HTR1AP08908 422 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 GNAO1P09471 354 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 ZNF12P17014 697 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 ACTA2P62736 377 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 ACTG2P63267 376 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 RAB40BQ12829 278 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 GALEQ14376 348 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 FAM76BQ5HYJ3 339 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 TTC23Q5W5X9 447 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 WDR25Q64LD2 544 aaPredicted RBP12.35□□□□□ -0.43
HDAC4-204ENST00000446876 HAGHLQ6PII5 290 aaPredicted RBP12.35□□□□□ -0.43
HDAC4-204ENST00000446876 FGFRL1Q8N441 504 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 OR5T2Q8NGG2 359 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 TRMT10AQ8TBZ6 339 aaKnown RBP12.35□□□□□ -0.43
HDAC4-204ENST00000446876 NPRL2Q8WTW4 380 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 TECTBQ96PL2 329 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 DCLRE1BQ9H816 532 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 PLEKHA1Q9HB21 404 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 CLN8Q9UBY8 286 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 INSIG2Q9Y5U4 225 aa12.35□□□□□ -0.43
HDAC4-204ENST00000446876 PPIAL4CA0A0B4J2A2 164 aa12.34□□□□□ -0.43
HDAC4-204ENST00000446876 OR5B21A6NL26 309 aa12.34□□□□□ -0.43
HDAC4-204ENST00000446876 C22orf46C9J442 243 aa12.34□□□□□ -0.43
HDAC4-204ENST00000446876 E9PI62 339 aa12.34□□□□□ -0.43
HDAC4-204ENST00000446876 UBCP0CG48 685 aaKnown RBP12.34□□□□□ -0.43
HDAC4-204ENST00000446876 GATA3P23771 443 aa12.34□□□□□ -0.43
HDAC4-204ENST00000446876 CAPGP40121 348 aa12.34□□□□□ -0.43
HDAC4-204ENST00000446876 PAX2Q02962 417 aa12.34□□□□□ -0.43
HDAC4-204ENST00000446876 KCNJ8Q15842 424 aa12.34□□□□□ -0.43
HDAC4-204ENST00000446876 KCTD20Q7Z5Y7 419 aa12.34□□□□□ -0.43
HDAC4-204ENST00000446876 BATF2Q8N1L9 274 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms