RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 EPPINO95925 133 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 H2AFB1P0C5Y9 115 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 PAFAH1B2P68402 229 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 ZNF117Q03924 483 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 ENDOGQ14249 297 aaKnown RBP7.64□□□□□ -1.19
PTPN3-204ENST00000446349 DNAJC5GQ8N7S2 189 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 TMED3Q9Y3Q3 217 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 TAF9Q16594 264 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 C2orf76Q3KRA6 126 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 MRGPREQ86SM8 312 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 SHISA5Q8N114 240 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 ZDHHC22Q8N966 263 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 APH1BQ8WW43 257 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 C3orf49Q96BT1 292 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 FYTTD1Q96QD9 318 aaKnown RBP7.64□□□□□ -1.19
PTPN3-204ENST00000446349 UMAD1C9J7I0 102 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 OR5H8P0DN80 308 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 PAX6P26367 422 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 ETV1P50549 477 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 ACOT7LQ6ZUV0 252 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 YIPF5Q969M3 257 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 SAP30LQ9HAJ7 183 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 ARID2Q68CP9 1835 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 ZFP36L2P47974 494 aaKnown RBP7.64□□□□□ -1.19
PTPN3-204ENST00000446349 STAC2Q6ZMT1 411 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 OR51S1Q8NGJ8 323 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 OR1L4Q8NGR5 311 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 RPP25Q9BUL9 199 aaKnown RBP7.64□□□□□ -1.19
PTPN3-204ENST00000446349 DNAJB12Q9NXW2 375 aaKnown RBP7.64□□□□□ -1.19
PTPN3-204ENST00000446349 SERGEFQ9UGK8 458 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 NPTNQ9Y639 398 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 PLPP3O14495 311 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 NDUFA2O43678 99 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 FUCA1P04066 466 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 OR5G3P0C626 314 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 OPCMLQ14982 345 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 HIST2H3PS2Q5TEC6 136 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 SLC23A3Q6PIS1 610 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 ARSGQ96EG1 525 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 WDR61Q9GZS3 305 aaKnown RBP7.64□□□□□ -1.19
PTPN3-204ENST00000446349 MYOFQ9NZM1 2061 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 SDCBPO00560 298 aaPredicted RBP7.64□□□□□ -1.19
PTPN3-204ENST00000446349 CCL21O00585 134 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 NGFP01138 241 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 FGF5P12034 268 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 FPR2P25090 351 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 ISL1P61371 349 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 SMN1Q16637 294 aaKnown RBP7.64□□□□□ -1.19
PTPN3-204ENST00000446349 OR4F17Q8NGA8 305 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 OR4F5Q8NH21 305 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 OR4F4Q96R69 305 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 ZNF225Q9UK10 706 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 LRP12Q9Y561 859 aa7.64□□□□□ -1.19
PTPN3-204ENST00000446349 APC2O95996 2303 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 PSME4Q14997 1843 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 KRBA1A5PL33 1030 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 TXNDC12O95881 172 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 NGFRP08138 427 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 PRR35P0CG20 571 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 ATP6V1FQ16864 119 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 DCAF10Q5QP82 559 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 CALHM3Q86XJ0 350 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 SLC25A37Q9NYZ2 338 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 ZNF705FA8MVS1 300 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-204ENST00000446349 ZNF705DP0CH99 300 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-204ENST00000446349 ZNF705BP0CI00 300 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-204ENST00000446349 GZMHP20718 246 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 TFF2Q03403 129 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 ZBTB34Q8NCN2 500 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 DNASE2BQ8WZ79 361 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 SLC35D1Q9NTN3 355 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 NTMQ9P121 344 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 RALGAPA1Q6GYQ0 2036 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 MS4A18H0YCH9 400 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 F2RL2O00254 374 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 LANCL1O43813 399 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 CTSVO60911 334 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 MS4A18Q3C1V0 323 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 TMEM30BQ3MIR4 351 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 RPL7L1Q6DKI1 246 aaKnown RBP7.63□□□□□ -1.19
PTPN3-204ENST00000446349 NCCRP1Q6ZVX7 275 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-204ENST00000446349 NTNG2Q96CW9 530 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 CXorf58Q96LI9 332 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-204ENST00000446349 ADAMTSL1Q8N6G6 1762 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 NRXN2Q9P2S2 1712 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 ETHE1O95571 254 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 FTH1P19P0C7X4 201 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 EPXP11678 715 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 ZNF528Q3MIS6 628 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 ADAM5Q6NVV9 412 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 LYSMD2Q8IV50 215 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 OR2M7Q8NG81 312 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 OR1L6Q8NGR2 347 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 OR4S2Q8NH73 311 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 SLC7A6Q92536 515 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 EXTL1Q92935 676 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 ERGIC1Q969X5 290 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 C2orf50Q96LR7 162 aa7.63□□□□□ -1.19
PTPN3-204ENST00000446349 RAB40CQ96S21 281 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms