RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 GJC3Q8NFK1 279 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 FBXO17Q96EF6 278 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 RRNAD1Q96FB5 475 aaKnown RBP10.49□□□□□ -0.73
MSH6-204ENST00000445503 METTL9Q9H1A3 318 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 C5orf66Q9H5L9 145 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 RAB18Q9NP72 206 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 FAM212BQ9NTI7 297 aaPredicted RBP10.49□□□□□ -0.73
MSH6-204ENST00000445503 FAM206AQ9NX38 181 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 FBXL17Q9UF56 701 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 PTRH2Q9Y3E5 179 aaKnown RBP10.49□□□□□ -0.73
MSH6-204ENST00000445503 H3BMH7 237 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 M0R135 149 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 PIAS2O75928 621 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 MUC1P15941 1255 aaPredicted RBP10.49□□□□□ -0.73
MSH6-204ENST00000445503 IGFBP3P17936 291 aaPredicted RBP10.49□□□□□ -0.73
MSH6-204ENST00000445503 GALNSP34059 522 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 OR2A2Q6IF42 318 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 PAQR4Q8N4S7 273 aaPredicted RBP10.49□□□□□ -0.73
MSH6-204ENST00000445503 OR9K2Q8NGE7 335 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 ZNF799Q96GE5 643 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 FN3KRPQ9HA64 309 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 SLC7A11Q9UPY5 501 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 RALGAPA1Q6GYQ0 2036 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 ZNF98A6NK75 572 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 ADAM10O14672 748 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 JMJD7P0C870 316 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 ZNF44P15621 663 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 PNLIPP16233 465 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 ZNF16P17020 682 aaPredicted RBP10.49□□□□□ -0.73
MSH6-204ENST00000445503 MSR1P21757 451 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 CALCRP30988 508 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 OR14L1PQ8NHC6 308 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 CNTNAP3Q9BZ76 1288 aa10.49□□□□□ -0.73
MSH6-204ENST00000445503 EPHA1P21709 976 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 HOGA1Q86XE5 327 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 TMEM217Q8N7C4 229 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 SLC38A9Q8NBW4 561 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 DYRK2Q92630 601 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 PRRG4Q9BZD6 226 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 LPAR3Q9UBY5 353 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 CYB5R1Q9UHQ9 305 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 A0A1B0GTI1 187 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 A0A1B0GTQ1 180 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 RAMP1O60894 148 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 RD3LP0DJH9 198 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 HTR5AP47898 357 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 GRB2P62993 217 aaKnown RBP10.48□□□□□ -0.73
MSH6-204ENST00000445503 SLC35A1P78382 337 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 SRYQ05066 204 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 HNF4GQ14541 408 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 PLAC9Q5JTB6 97 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 ZNF529Q6P280 563 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 ANKRD37Q7Z713 158 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 PPP1R3BQ86XI6 285 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 GPR137CQ8N3F9 429 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 OR13G1Q8NGZ3 307 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 MRGPRX4Q96LA9 322 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 OXGR1Q96P68 337 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 SYT3Q9BQG1 590 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 NAA11Q9BSU3 229 aaPredicted RBP10.48□□□□□ -0.73
MSH6-204ENST00000445503 FANCFQ9NPI8 374 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 NIT2Q9NQR4 276 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 LUZP4Q9P127 313 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 AMDHD2Q9Y303 409 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 SPINK2P20155 84 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 IKZF1Q13422 519 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 ARL6IP1Q15041 203 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 TMEM182Q6ZP80 229 aaPredicted RBP10.48□□□□□ -0.73
MSH6-204ENST00000445503 Q7L0L9 218 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 LINC00518Q8N0U6 118 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 ARHGEF39Q8N4T4 335 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 KIRREL1Q96J84 757 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 MOB1AQ9H8S9 216 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 LHFPL6Q9Y693 200 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 CACNA1EQ15878 2313 aa10.48□□□□□ -0.73
MSH6-204ENST00000445503 C9J4A7 227 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 ISG15P05161 165 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 RPS10P46783 165 aaKnown RBP10.47□□□□□ -0.73
MSH6-204ENST00000445503 TMEM33P57088 247 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 COL13A1Q5TAT6 717 aaPredicted RBP10.47□□□□□ -0.73
MSH6-204ENST00000445503 FAM166AQ6J272 317 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 FAHD2BQ6P2I3 314 aaPredicted RBP10.47□□□□□ -0.73
MSH6-204ENST00000445503 SLC22A25Q6T423 547 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 C1QL2Q7Z5L3 287 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 RXFP4Q8TDU9 374 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 RTN4IP1Q8WWV3 396 aaPredicted RBP10.47□□□□□ -0.73
MSH6-204ENST00000445503 FAHD2AQ96GK7 314 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 NMES1Q9C002 83 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 OR51B6Q9H340 312 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 GPR132Q9UNW8 380 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 H0YIZ8 118 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 ZNHIT1O43257 154 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 GLB1P16278 677 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 MIDNQ504T8 468 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 GGNBP1Q5YKI7 109 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 PLCXD3Q63HM9 321 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 SLC16A13Q7RTY0 426 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 ZNF695Q8IW36 515 aa10.47□□□□□ -0.73
MSH6-204ENST00000445503 MRPL24Q96A35 216 aaKnown RBP10.47□□□□□ -0.73
MSH6-204ENST00000445503 PRRX2Q99811 253 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms