RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 GABARAPL2P60520 117 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 BDH1Q02338 343 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 SPHARQ15513 63 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 AVPI1Q5T686 147 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 Q6ZSR3 168 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 KRT74Q7RTS7 529 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 BIVMQ86UB2 503 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 SERPINA12Q8IW75 414 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 SVOPQ8N4V2 548 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 BOLLQ8N9W6 283 aaKnown RBP11.9□□□□□ -0.5
SSBP3-208ENST00000444533 ZNF671Q8TAW3 534 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 CHST5Q9GZS9 411 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 DUSP21Q9H596 190 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 NARFLQ9H6Q4 476 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 ERVK-18Q9QC07 812 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 POLDIP2Q9Y2S7 368 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 PPIAL4EA0A075B759 164 aa11.89□□□□□ -0.51
SSBP3-208ENST00000444533 PPIAL4DF5H284 164 aa11.89□□□□□ -0.51
SSBP3-208ENST00000444533 OGG1O15527 345 aa11.89□□□□□ -0.51
SSBP3-208ENST00000444533 PTBP3O95758 552 aaKnown RBP11.89□□□□□ -0.51
SSBP3-208ENST00000444533 CYB5AP00167 134 aa11.89□□□□□ -0.51
SSBP3-208ENST00000444533 CYB5R3P00387 301 aaPredicted RBP11.89□□□□□ -0.51
SSBP3-208ENST00000444533 PPIAL4FP0DN26 164 aa11.89□□□□□ -0.51
SSBP3-208ENST00000444533 CELP19835 753 aa11.89□□□□□ -0.51
SSBP3-208ENST00000444533 FUT6P51993 359 aa11.89□□□□□ -0.51
SSBP3-208ENST00000444533 ZNF154Q13106 437 aa11.89□□□□□ -0.51
SSBP3-208ENST00000444533 MPPED2Q15777 294 aa11.89□□□□□ -0.51
SSBP3-208ENST00000444533 SPRNQ5BIV9 151 aa11.89□□□□□ -0.51
SSBP3-208ENST00000444533 YIF1BQ5BJH7 314 aa11.89□□□□□ -0.51
SSBP3-208ENST00000444533 TMEM42Q69YG0 159 aa11.89□□□□□ -0.51
SSBP3-208ENST00000444533 BORCS8Q96FH0 119 aa11.89□□□□□ -0.51
SSBP3-208ENST00000444533 UBAP1Q9NZ09 502 aa11.89□□□□□ -0.51
SSBP3-208ENST00000444533 CKLFQ9UBR5 152 aa11.89□□□□□ -0.51
SSBP3-208ENST00000444533 PPIAL4AQ9Y536 164 aa11.89□□□□□ -0.51
SSBP3-208ENST00000444533 OTOGQ6ZRI0 2925 aa11.89□□□□□ -0.51
SSBP3-208ENST00000444533 TRAV38-1A0A0B4J264 116 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 IGHV4-61A0A0C4DH41 118 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 PNMA8CA0A1B0GUJ8 204 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 FAM230AA0A1W2PPH8 454 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 CDIPTO14735 213 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 HSMCR30P0CW71 290 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 MAPK3P27361 379 aaPredicted RBP11.88□□□□□ -0.51
SSBP3-208ENST00000444533 ATP1B3P54709 279 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 PPP3R1P63098 170 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 MICBQ29980 383 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 TMEM155Q4W5P6 130 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 CYB5R2Q6BCY4 276 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 DMKNQ6E0U4 476 aaPredicted RBP11.88□□□□□ -0.51
SSBP3-208ENST00000444533 UTS2BQ765I0 119 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 NLRC3Q7RTR2 1065 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 CIARTQ8N365 385 aaPredicted RBP11.88□□□□□ -0.51
SSBP3-208ENST00000444533 MAPK1IP1LQ8NDC0 245 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 TRMT10AQ8TBZ6 339 aaKnown RBP11.88□□□□□ -0.51
SSBP3-208ENST00000444533 LRRC29Q8WV35 223 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 HPSE2Q8WWQ2 592 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 GHSRQ92847 366 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 UFD1Q92890 307 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 RNF166Q96A37 237 aaPredicted RBP11.88□□□□□ -0.51
SSBP3-208ENST00000444533 SPSB1Q96BD6 273 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 PAK1IP1Q9NWT1 392 aaPredicted RBP11.88□□□□□ -0.51
SSBP3-208ENST00000444533 DNAJB11Q9UBS4 358 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 ITPR3Q14573 2671 aa11.88□□□□□ -0.51
SSBP3-208ENST00000444533 DYSFO75923 2080 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 NDUFA2O43678 99 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 PLPP2O43688 288 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 FSTL3O95633 263 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 IGHV2-70P01814 119 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 MT-ND2P03891 347 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 CD1AP06126 327 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 CPT2P23786 658 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 THBS2P35442 1172 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 HAAOP46952 286 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 SOX2P48431 317 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 RBP2P50120 134 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 ACSM1Q08AH1 577 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 TMEM249Q2WGJ8 235 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 FAM76BQ5HYJ3 339 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 XAF1Q6GPH4 301 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 HAGHLQ6PII5 290 aaPredicted RBP11.87□□□□□ -0.51
SSBP3-208ENST00000444533 CLEC9AQ6UXN8 241 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 LHFPL2Q6ZUX7 228 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 LRRC28Q86X40 367 aaPredicted RBP11.87□□□□□ -0.51
SSBP3-208ENST00000444533 MS4A15Q8N5U1 240 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 ZFP41Q8N8Y5 198 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 SCCPDHQ8NBX0 429 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 DNAAF1Q8NEP3 725 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 OR51A4Q8NGJ6 313 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 OR10Z1Q8NGY1 313 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 CLDND2Q8NHS1 167 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 NPRL2Q8WTW4 380 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 RPL3LQ92901 407 aaKnown RBP11.87□□□□□ -0.51
SSBP3-208ENST00000444533 TMEM106AQ96A25 262 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 ADAT3Q96EY9 351 aaPredicted RBP11.87□□□□□ -0.51
SSBP3-208ENST00000444533 TLNRD1Q9H1K6 362 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 ZCCHC4Q9H5U6 513 aa11.87□□□□□ -0.51
SSBP3-208ENST00000444533 CHD3Q12873 2000 aaKnown RBP11.87□□□□□ -0.51
SSBP3-208ENST00000444533 J3QT63 122 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 LGALS8O00214 317 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 SULT1B1O43704 296 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 HCKP08631 526 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms