RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 ROM1Q03395 351 aa11.82□□□□□ -0.52
ACTN1-204ENST00000438964 CLEC12BQ2HXU8 276 aa11.82□□□□□ -0.52
ACTN1-204ENST00000438964 C1orf140Q5VVS0 124 aa11.82□□□□□ -0.52
ACTN1-204ENST00000438964 FDX2Q6P4F2 183 aa11.82□□□□□ -0.52
ACTN1-204ENST00000438964 MAMDC2Q7Z304 686 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-204ENST00000438964 SUMF2Q8NBJ7 301 aa11.82□□□□□ -0.52
ACTN1-204ENST00000438964 OR1J1Q8NGS3 322 aa11.82□□□□□ -0.52
ACTN1-204ENST00000438964 ASB16Q96NS5 453 aa11.82□□□□□ -0.52
ACTN1-204ENST00000438964 OR5B2Q96R09 309 aa11.82□□□□□ -0.52
ACTN1-204ENST00000438964 ZNF2Q9BSG1 426 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-204ENST00000438964 PLA2G2FQ9BZM2 168 aa11.82□□□□□ -0.52
ACTN1-204ENST00000438964 PBOV1Q9GZY1 135 aa11.82□□□□□ -0.52
ACTN1-204ENST00000438964 HDGFL3Q9Y3E1 203 aa11.82□□□□□ -0.52
ACTN1-204ENST00000438964 A0A087X0M5 115 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 A0A1B0GX30 115 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 CDC14BO60729 498 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 MYOGP15173 224 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 FSTP19883 344 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 PLA2G5P39877 138 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 PDCD1Q15116 288 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 HEPN1Q6WQI6 88 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 C6orf201Q7Z4U5 140 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 LYPD6Q86Y78 171 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 SLC37A2Q8TED4 501 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 GTF3AQ92664 365 aaKnown RBP11.81□□□□□ -0.52
ACTN1-204ENST00000438964 DAZLQ92904 295 aaKnown RBP11.81□□□□□ -0.52
ACTN1-204ENST00000438964 TAAR9Q96RI9 348 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 FAM212BQ9NTI7 297 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-204ENST00000438964 C2orf74A8MZ97 194 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 GPR89AB7ZAQ6 455 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 PHOX2AO14813 284 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 TNFSF14O43557 240 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 SOX15O60248 233 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 HIST1H2BKO60814 126 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 SRSF10O75494 262 aaKnown RBP11.81□□□□□ -0.52
ACTN1-204ENST00000438964 HIST1H2BJP06899 126 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 GPR89BP0CG08 455 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 HIST1H2BOP23527 126 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 BLVRBP30043 206 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-204ENST00000438964 HIST1H2BBP33778 126 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 CDX1P47902 265 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-204ENST00000438964 HIST1H2BDP58876 126 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 HIST1H2BCP62807 126 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 HIST2H2BEQ16778 126 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 CHRFAM7AQ494W8 412 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-204ENST00000438964 LYZL2Q7Z4W2 148 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 ZNF519Q8TB69 540 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 HIST1H2BHQ93079 126 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 RAB39BQ96DA2 213 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 THOC3Q96J01 351 aaKnown RBP11.81□□□□□ -0.52
ACTN1-204ENST00000438964 HIST1H2BNQ99877 126 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 HIST1H2BMQ99879 126 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 PCDH15Q96QU1 1955 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 BTBD17A6NE02 478 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 NUDT21O43809 227 aaKnown RBP11.81□□□□□ -0.52
ACTN1-204ENST00000438964 PET100P0DJ07 73 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 C5AR1P21730 350 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 LSM6P62312 80 aaKnown RBP11.81□□□□□ -0.52
ACTN1-204ENST00000438964 EMC4Q5J8M3 183 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 SLAMF6Q96DU3 332 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 LIPGQ9Y5X9 500 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 ZNF407Q9C0G0 2248 aa11.81□□□□□ -0.52
ACTN1-204ENST00000438964 NCOA6Q14686 2063 aaPredicted RBP11.8□□□□□ -0.52
ACTN1-204ENST00000438964 TMED7-TICAM2A0A0A6YYA0 188 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 DHRS7CA6NNS2 312 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 JTBO76095 146 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 MBPP02686 304 aaPredicted RBP11.8□□□□□ -0.52
ACTN1-204ENST00000438964 CFPP27918 469 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 MFAP5Q13361 173 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 TOMM20Q15388 145 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 FNDC7Q5VTL7 733 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 C5orf24Q7Z6I8 188 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 OR52M1Q8NGK5 317 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 BMFQ96LC9 184 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 TBL1XR1Q9BZK7 514 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 SLC35B3Q9H1N7 401 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 S1PR5Q9H228 398 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 TXNIPQ9H3M7 391 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 TUBA4BQ9H853 241 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 PISDQ9UG56 409 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 NXT1Q9UKK6 140 aaKnown RBP11.8□□□□□ -0.52
ACTN1-204ENST00000438964 PADI1Q9ULC6 663 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 TRAV36DV7A0A075B6V5 113 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 LOC390937A0A1W2PQ73 354 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 B4DGG1 531 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 H3BQ15 152 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 FPR2P25090 351 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 SLC35A1P78382 337 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 FOXK1P85037 733 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 CHAF1BQ13112 559 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 HNF4GQ14541 408 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 TGIF2LXQ8IUE1 241 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 OR5L1Q8NGL2 311 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 OR5D14Q8NGL3 314 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 SNX22Q96L94 193 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 SSX3Q99909 188 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 GPR84Q9NQS5 396 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 LANCL2Q9NS86 450 aa11.8□□□□□ -0.52
ACTN1-204ENST00000438964 B3GALT5Q9Y2C3 310 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms