RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 H3BUX3 64 aa9.09□□□□□ -0.95
CSTF3-203ENST00000438862 ADAM20O43506 726 aa9.09□□□□□ -0.95
CSTF3-203ENST00000438862 ZNF3P17036 446 aa9.09□□□□□ -0.95
CSTF3-203ENST00000438862 PAICSP22234 425 aaKnown RBP9.09□□□□□ -0.95
CSTF3-203ENST00000438862 EPHA2P29317 976 aa9.09□□□□□ -0.95
CSTF3-203ENST00000438862 AQP4P55087 323 aa9.09□□□□□ -0.95
CSTF3-203ENST00000438862 SNRPGP62308 76 aaKnown RBP9.09□□□□□ -0.95
CSTF3-203ENST00000438862 ZIK1Q3SY52 487 aaPredicted RBP9.09□□□□□ -0.95
CSTF3-203ENST00000438862 CLEC12AQ5QGZ9 265 aa9.09□□□□□ -0.95
CSTF3-203ENST00000438862 MEDAGQ5VYS4 303 aa9.09□□□□□ -0.95
CSTF3-203ENST00000438862 RNF144BQ7Z419 303 aa9.09□□□□□ -0.95
CSTF3-203ENST00000438862 CMTM4Q8IZR5 234 aa9.09□□□□□ -0.95
CSTF3-203ENST00000438862 OR5L1Q8NGL2 311 aa9.09□□□□□ -0.95
CSTF3-203ENST00000438862 Q96M85 177 aa9.09□□□□□ -0.95
CSTF3-203ENST00000438862 RBP7Q96R05 134 aa9.09□□□□□ -0.95
CSTF3-203ENST00000438862 SSX3Q99909 188 aa9.09□□□□□ -0.95
CSTF3-203ENST00000438862 GPR61Q9BZJ8 451 aa9.09□□□□□ -0.95
CSTF3-203ENST00000438862 VSX1Q9NZR4 365 aaPredicted RBP9.09□□□□□ -0.95
CSTF3-203ENST00000438862 RPUSD1Q9UJJ7 312 aaKnown RBP9.09□□□□□ -0.95
CSTF3-203ENST00000438862 ADAM18Q9Y3Q7 739 aa9.09□□□□□ -0.95
CSTF3-203ENST00000438862 LRRC42Q9Y546 428 aa9.09□□□□□ -0.95
CSTF3-203ENST00000438862 DNAH1Q9P2D7 4330 aa9.09□□□□□ -0.95
CSTF3-203ENST00000438862 TEX13CA0A0J9YWL9 993 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 IGHV3-64DA0A0J9YX35 117 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 A0A1B0GWJ7 208 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 MEIOCA2RUB1 952 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 SNTNA6NMZ2 147 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 C12orf71A8MTZ7 269 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 LGALS8O00214 317 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 MLNRO43193 412 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 DENRO43583 198 aaKnown RBP9.08□□□□□ -0.96
CSTF3-203ENST00000438862 RENP00797 406 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 HIST1H1CP16403 213 aaKnown RBP9.08□□□□□ -0.96
CSTF3-203ENST00000438862 LMO1P25800 156 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 CRABP1P29762 137 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 BLVRAP53004 296 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 SLC25A1P53007 311 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 ACSM1Q08AH1 577 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 TMED1Q13445 227 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 KRR1Q13601 381 aaKnown RBP9.08□□□□□ -0.96
CSTF3-203ENST00000438862 SNAPC1Q16533 368 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 ZNF691Q5VV52 312 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 OR2T2Q6IF00 324 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 DNM1P34Q6PK57 102 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 SLC25A47Q6Q0C1 308 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 CRIP3Q6Q6R5 217 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 FBXW12Q6X9E4 464 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 C19orf18Q8NEA5 215 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 RHOXF1Q8NHV9 184 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 DPF1Q92782 380 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 RASD2Q96D21 266 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 NMD3Q96D46 503 aaKnown RBP9.08□□□□□ -0.96
CSTF3-203ENST00000438862 Q96MT0 163 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 ANKRD60Q9BZ19 345 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 SMURF1Q9HCE7 757 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 TMEM100Q9NV29 134 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 IMPAD1Q9NX62 359 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 TVP23BQ9NYZ1 205 aa9.08□□□□□ -0.96
CSTF3-203ENST00000438862 TRAV38-1A0A0B4J264 116 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 DVL1O14640 695 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 PRODHO43272 600 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 PF4V1P10720 104 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 SAA4P35542 130 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 CDKN2AP42771 156 aaKnown RBP9.07□□□□□ -0.96
CSTF3-203ENST00000438862 ISL1P61371 349 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 CSNK2BP67870 215 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.07□□□□□ -0.96
CSTF3-203ENST00000438862 LY6EQ16553 131 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 AANATQ16613 207 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 MESTQ5EB52 335 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 DMRTC1Q5HYR2 192 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 NXNL2Q5VZ03 156 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 TMEM236Q5W0B7 351 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 PTCHD4Q6ZW05 846 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 ZBTB46Q86UZ6 589 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 C8orf59Q8N0T1 100 aaPredicted RBP9.07□□□□□ -0.96
CSTF3-203ENST00000438862 SLC37A3Q8NCC5 494 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 LY6G5BQ8NDX9 201 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 OR2T4Q8NH00 348 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 OR4K13Q8NH42 304 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 TMEM163Q8TC26 289 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 WIPF2Q8TF74 440 aaPredicted RBP9.07□□□□□ -0.96
CSTF3-203ENST00000438862 FBLIM1Q8WUP2 373 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 CYGBQ8WWM9 190 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 HDAC2Q92769 488 aaKnown RBP9.07□□□□□ -0.96
CSTF3-203ENST00000438862 RFKQ969G6 155 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 NMNAT2Q9BZQ4 307 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 SERTAD4Q9NUC0 356 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 ONECUT1Q9UBC0 465 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 RNF7Q9UBF6 113 aa9.07□□□□□ -0.96
CSTF3-203ENST00000438862 ZMAT5Q9UDW3 170 aaKnown RBP9.07□□□□□ -0.96
CSTF3-203ENST00000438862 IGKV1D-43A0A0B4J1Z2 117 aa9.06□□□□□ -0.96
CSTF3-203ENST00000438862 IQCF6A8MYZ5 107 aa9.06□□□□□ -0.96
CSTF3-203ENST00000438862 PRR23D1E9PI22 279 aaPredicted RBP9.06□□□□□ -0.96
CSTF3-203ENST00000438862 PAX4O43316 350 aa9.06□□□□□ -0.96
CSTF3-203ENST00000438862 FAM20BO75063 409 aa9.06□□□□□ -0.96
CSTF3-203ENST00000438862 PEX14O75381 377 aa9.06□□□□□ -0.96
CSTF3-203ENST00000438862 PF4P02776 101 aa9.06□□□□□ -0.96
CSTF3-203ENST00000438862 PRR23D2P0DMB1 279 aaPredicted RBP9.06□□□□□ -0.96
CSTF3-203ENST00000438862 GABRB1P18505 474 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms