RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 FOXO1Q12778 655 aa12.18□□□□□ -0.46
PTCHD3-201ENST00000438700 OR1C1Q15619 314 aa12.18□□□□□ -0.46
PTCHD3-201ENST00000438700 HFEQ30201 348 aa12.18□□□□□ -0.46
PTCHD3-201ENST00000438700 WIPI1Q5MNZ9 446 aaPredicted RBP12.18□□□□□ -0.46
PTCHD3-201ENST00000438700 UNQ6126/PRO20091Q6UXV3 157 aa12.18□□□□□ -0.46
PTCHD3-201ENST00000438700 C12orf45Q8N5I9 185 aaPredicted RBP12.18□□□□□ -0.46
PTCHD3-201ENST00000438700 TMEM104Q8NE00 496 aa12.18□□□□□ -0.46
PTCHD3-201ENST00000438700 C2CD4CQ8TF44 421 aa12.18□□□□□ -0.46
PTCHD3-201ENST00000438700 TSNAXQ99598 290 aaKnown RBP12.18□□□□□ -0.46
PTCHD3-201ENST00000438700 VRK1Q99986 396 aaPredicted RBP12.18□□□□□ -0.46
PTCHD3-201ENST00000438700 MICU1Q9BPX6 476 aa12.18□□□□□ -0.46
PTCHD3-201ENST00000438700 DNTTIP1Q9H147 329 aa12.18□□□□□ -0.46
PTCHD3-201ENST00000438700 SLCO5A1Q9H2Y9 848 aa12.18□□□□□ -0.46
PTCHD3-201ENST00000438700 MLXQ9UH92 298 aa12.18□□□□□ -0.46
PTCHD3-201ENST00000438700 ARGFXA6NJG6 315 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 F5H5K5 113 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 H7C2Y5 167 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 TLX3O43711 291 aaPredicted RBP12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 ATG12O94817 140 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 BPNT1O95861 308 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 HCKP08631 526 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 RFC3P40938 356 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 CBX5P45973 191 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 SLC6A9P48067 706 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 CSNK1A1P48729 337 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 SRSF6Q13247 344 aaKnown RBP12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 RSPO4Q2I0M5 234 aaPredicted RBP12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 ATPAF1Q5TC12 328 aaPredicted RBP12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 RAB12Q6IQ22 244 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 OR2M7Q8NG81 312 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 OR13C8Q8NGS7 320 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 NPRL2Q8WTW4 380 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 UQCC2Q9BRT2 126 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 MOB1AQ9H8S9 216 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 UPB1Q9UBR1 384 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 BOKQ9UMX3 212 aaPredicted RBP12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 A0A1W2PP11 408 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 RNF222A6NCQ9 220 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 GJE1A6NN92 205 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 NPIPA2E9PIF3 369 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 NPIPA3F8WFD2 350 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 CD74P04233 296 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 GUCA1AP43080 201 aaPredicted RBP12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 NOVA1P51513 510 aaKnown RBP12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 ATP1B3P54709 279 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 PPIAP62937 165 aaKnown RBP12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 CSNK2A1P68400 391 aaPredicted RBP12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 RNASE10Q5GAN6 216 aaKnown RBP12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 ZNF529Q6P280 563 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 GLIPR1L1Q6UWM5 242 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 OR5AS1Q8N127 324 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 ZFP82Q8N141 532 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 FAM173AQ9BQD7 235 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 SLC25A21Q9BQT8 299 aaPredicted RBP12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 SRXN1Q9BYN0 137 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 BANF2Q9H503 90 aa12.17□□□□□ -0.46
PTCHD3-201ENST00000438700 LOC102725191A0A1B0GVB3 256 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 EIF1BO60739 113 aaKnown RBP12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 MPIG6BO95866 241 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 UBBP0CG47 229 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 HRH1P35367 487 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 RPS27AP62979 156 aaKnown RBP12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 UBA52P62987 128 aaKnown RBP12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 CXADRP78310 365 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 OR5D18Q8NGL1 313 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 CCDC107Q8WV48 283 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 KCNE4Q8WWG9 221 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 RBM24Q9BX46 236 aaKnown RBP12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 TMEM231Q9H6L2 316 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 ASF1BQ9NVP2 202 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 ATPIF1Q9UII2 106 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 MRPS28Q9Y2Q9 187 aaKnown RBP12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 CEP250Q9BV73 2442 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 ERCC1P07992 297 aaPredicted RBP12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 CAPZA1P52907 286 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 GGNQ86UU5 652 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 TMEM17Q86X19 198 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 GPER1Q99527 375 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 CMSS1Q9BQ75 279 aaKnown RBP12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 PDCD10Q9BUL8 212 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 VSIG4Q9Y279 399 aa12.16□□□□□ -0.46
PTCHD3-201ENST00000438700 KANTRA0A1W2PQU2 76 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 OR5H15A6NDH6 313 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 FAM25EA8MYX2 175 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 HLA-AP01891 365 aaKnown RBP12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 CEACAM1P13688 526 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 MSR1P21757 451 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 DHRS2Q13268 280 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 MPPED2Q15777 294 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 RHOUQ7L0Q8 258 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 SULF2Q8IWU5 870 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 KCNRGQ8N5I3 272 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 OR10R2Q8NGX6 335 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 PPP1R1CQ8WVI7 109 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 ZNF837Q96EG3 531 aaPredicted RBP12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 NAA11Q9BSU3 229 aaPredicted RBP12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 TNFSF18Q9UNG2 199 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 PLEKHA6Q9Y2H5 1048 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 KCNK7Q9Y2U2 307 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 FAM186AA6NE01 2351 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms