RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 SLC25A40Q8TBP6 338 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 RHNO1Q9BSD3 238 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 MS4A5Q9H3V2 200 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 SAP30LQ9HAJ7 183 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 TMEM127O75204 238 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 OR3A1P47881 315 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 OR10V1Q8NGI7 309 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 OR2I1PQ8NGU4 316 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 OR10Z1Q8NGY1 313 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 Q8WTZ3 238 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 MMP7P09237 267 aaPredicted RBP10.07□□□□□ -0.8
SCN4A-201ENST00000435607 MGMTP16455 207 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 WIPI1Q5MNZ9 446 aaPredicted RBP10.07□□□□□ -0.8
SCN4A-201ENST00000435607 OR4D9Q8NGE8 314 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 SORT1Q99523 831 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 NPAS1Q99742 590 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 PTDSS2Q9BVG9 487 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 MRPL37Q9BZE1 423 aaKnown RBP10.07□□□□□ -0.8
SCN4A-201ENST00000435607 ANXA10Q9UJ72 324 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 POMT2Q9UKY4 750 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 FAM87AP0C7U9 286 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 CD40P25942 277 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 KRTDAPP60985 99 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 LYZP61626 148 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 YBX1P67809 324 aaKnown RBP10.07□□□□□ -0.8
SCN4A-201ENST00000435607 SSBP1Q04837 148 aaKnown RBP10.07□□□□□ -0.8
SCN4A-201ENST00000435607 FUT7Q11130 342 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 C1orf220Q5T0J3 134 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 CXorf67Q86X51 503 aaPredicted RBP10.07□□□□□ -0.8
SCN4A-201ENST00000435607 TGIF2LYQ8IUE0 185 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 TGIF2LXQ8IUE1 241 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 VRK3Q8IV63 474 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 AKR7LQ8NHP1 331 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 ASB13Q8WXK3 278 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 ZNF230Q9UIE0 474 aaPredicted RBP10.07□□□□□ -0.8
SCN4A-201ENST00000435607 N4BP2Q86UW6 1770 aaPredicted RBP10.07□□□□□ -0.8
SCN4A-201ENST00000435607 TOMM34Q15785 309 aaPredicted RBP10.07□□□□□ -0.8
SCN4A-201ENST00000435607 C5orf17Q8NAS9 161 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 ADGRL4Q9HBW9 690 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 CCL21O00585 134 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 PHOX2AO14813 284 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 GJB3O75712 270 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 PATE1Q8WXA2 126 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 FAM221AA4D161 298 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 C5orf52A6NGY3 159 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 BMPR1BO00238 502 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 FAHP16930 419 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 FAHD1Q6P587 224 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 UNQ9370/PRO34162Q6UXP9 181 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.06□□□□□ -0.8
SCN4A-201ENST00000435607 RABAC1Q9UI14 185 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 A0A1W2PR48 441 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 FGF17O60258 216 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 FCGR3BO75015 233 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 DIO1P49895 249 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 GNG4P50150 75 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 HLXQ14774 488 aaPredicted RBP10.06□□□□□ -0.8
SCN4A-201ENST00000435607 OR5AP2Q8NGF4 316 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 SLC25A22Q9H936 323 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 MED29Q9NX70 200 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 NUP205Q92621 2012 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 TMPRSS2O15393 492 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 GIPP09681 153 aaPredicted RBP10.06□□□□□ -0.8
SCN4A-201ENST00000435607 BTG2P78543 158 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 TNXAQ16473 311 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 ACER2Q5QJU3 275 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 RFLNAQ6ZTI6 216 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 LRP10Q7Z4F1 713 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 HELTA6NFD8 242 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 CTDSP2O14595 271 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 GLI4P10075 376 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 NME1P15531 152 aaKnown RBP10.06□□□□□ -0.8
SCN4A-201ENST00000435607 CCR6P51684 374 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 CMPK2Q5EBM0 449 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 RHOXF1Q8NHV9 184 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 KTI12Q96EK9 354 aaPredicted RBP10.06□□□□□ -0.8
SCN4A-201ENST00000435607 MRAP2Q96G30 205 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 C2orf50Q96LR7 162 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 UQCC1Q9NVA1 299 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 FZR1Q9UM11 496 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 LALBAP00709 142 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 ARNTP27540 789 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 PMP22Q01453 160 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 Q3ZCU0 254 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 ALKAL1Q6UXT8 129 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 C12orf10Q9HB07 376 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 FBXO8Q9NRD0 319 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 GFERP55789 205 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 EBLN2Q6P2I7 272 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 EXTL1Q92935 676 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 ZFP64Q9NPA5 681 aa10.06□□□□□ -0.8
SCN4A-201ENST00000435607 MRPL22Q9NWU5 206 aaKnown RBP10.06□□□□□ -0.8
SCN4A-201ENST00000435607 TMEM129A0AVI4 362 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 ASCL1P50553 236 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 BTG1P62324 171 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 PDPNQ86YL7 162 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 LRRC29Q8WV35 223 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 TIMP4Q99727 224 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 PGA3P0DJD8 388 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 TMPRSS3P57727 454 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms