RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 KLK3P07288 261 aaPredicted RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 ZNF35P13682 527 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 UCHL3P15374 230 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 CD36P16671 472 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 RPS12P25398 132 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 GCAP28676 217 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 PRDX3P30048 256 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 S100A7P31151 101 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 SERPINB5P36952 375 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 GPX4P36969 197 aaPredicted RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 PMELP40967 661 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 GLP1RP43220 463 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 MAGEA12P43365 314 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 RPL5P46777 297 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 DNASE1L1P49184 302 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 CX3CR1P49238 355 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 PRKXP51817 358 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 KRTAP10-10P60014 251 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 RPL8P62917 257 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 RPL19P84098 196 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 PRKCDQ05655 676 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 GRB7Q14451 532 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 ATP6V1FQ16864 119 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 TRMT5Q32P41 509 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 AKIRIN2Q53H80 203 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 PDZD11Q5EBL8 140 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 CARD16Q5EG05 197 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 ACTL10Q5JWF8 245 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 NIPAL1Q6NVV3 410 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 CYHR1Q6ZMK1 362 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 SLC25A48Q6ZT89 311 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 COX15Q7KZN9 410 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 APTXQ7Z2E3 356 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 HSD11B1LQ7Z5J1 315 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 THOC6Q86W42 341 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 ZNF547Q8IVP9 402 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 BLIDQ8IZY5 108 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 STPG2Q8N412 459 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 ZNF561Q8N587 486 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 ZSCAN4Q8NAM6 433 aaPredicted RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 OR2T33Q8NG76 320 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 OR10K1Q8NGX5 313 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 OR10X1Q8NGY0 326 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 OR5B3Q8NH48 314 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 SFXN5Q8TD22 340 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 ZNF721Q8TF20 911 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 EXOSC8Q96B26 276 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 TAMM41Q96BW9 452 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 TLCD1Q96CP7 247 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 OR2V2Q96R30 315 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 STACQ99469 402 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 C12orf57Q99622 126 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 SCRT1Q9BWW7 348 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 UGT2B28Q9BY64 529 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 COMMD4Q9H0A8 199 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 DEFB129Q9H1M3 183 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 VCXQ9H320 206 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 TMEM27Q9HBJ8 222 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 C6orf50Q9HD87 102 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 SH2D2AQ9NP31 389 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 CTPS2Q9NRF8 586 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 SLC2A9Q9NRM0 540 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 GSKIPQ9P0R6 139 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 ARL2BPQ9Y2Y0 163 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 MROH7Q68CQ1 1323 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 KIAA0232Q92628 1395 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 USP47Q96K76 1375 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 THSD7BQ9C0I4 1608 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 AQRO60306 1485 aaKnown RBP eCLIP1.98□□□□□ -2.099e-8■■■□□ 15.7
CLK1-204ENST00000432425 TRAV8-7A0A075B6U6 113 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 TGIF2-C20orf24A0A0A6YYL0 155 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 A0A1B0GTI1 187 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 TMEM150BA6NC51 233 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 ANKRD63C9JTQ0 380 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 M0QZK8 103 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 KCNK1O00180 336 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 TRAF3IP2O43734 574 aaPredicted RBP1.98□□□□□ -2.09
CLK1-204ENST00000432425 CST8O60676 142 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 EIF1BO60739 113 aaKnown RBP1.98□□□□□ -2.09
CLK1-204ENST00000432425 HPGDSO60760 199 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 EIF3GO75821 320 aaKnown RBP eCLIP1.98□□□□□ -2.09
CLK1-204ENST00000432425 GLSO94925 669 aaPredicted RBP1.98□□□□□ -2.09
CLK1-204ENST00000432425 INSP01308 110 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 C2P06681 752 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 OR8U9P0C7N5 309 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 ABOP16442 354 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 UGT2B7P16662 529 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 TCP1P17987 556 aaKnown RBP1.98□□□□□ -2.09
CLK1-204ENST00000432425 GZMHP20718 246 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 IMPDH1P20839 514 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 ADORA1P30542 326 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 GRPRP30550 384 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 GNRHRP30968 328 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 SSTR5P35346 364 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 CTRLP40313 264 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 OPRD1P41143 372 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 EIF1P41567 113 aaKnown RBP1.98□□□□□ -2.09
CLK1-204ENST00000432425 ACOT2P49753 483 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 IDH3GP51553 393 aaPredicted RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms