RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 PSG2P11465 335 aa12.48□□□□□ -0.41
NUP50-209ENST00000432340 ZNF823P16415 610 aa12.48□□□□□ -0.41
NUP50-209ENST00000432340 TAF13Q15543 124 aa12.48□□□□□ -0.41
NUP50-209ENST00000432340 TIGD6Q17RP2 521 aa12.48□□□□□ -0.41
NUP50-209ENST00000432340 ZNF260Q3ZCT1 412 aa12.48□□□□□ -0.41
NUP50-209ENST00000432340 ZNF730Q6ZMV8 503 aa12.48□□□□□ -0.41
NUP50-209ENST00000432340 KCTD8Q6ZWB6 473 aa12.48□□□□□ -0.41
NUP50-209ENST00000432340 RAX2Q96IS3 184 aa12.48□□□□□ -0.41
NUP50-209ENST00000432340 RBM14Q96PK6 669 aaKnown RBP12.48□□□□□ -0.41
NUP50-209ENST00000432340 GPX7Q96SL4 187 aaPredicted RBP12.48□□□□□ -0.41
NUP50-209ENST00000432340 COPS4Q9BT78 406 aa12.48□□□□□ -0.41
NUP50-209ENST00000432340 FNDC11Q9BVV2 318 aa12.48□□□□□ -0.41
NUP50-209ENST00000432340 NRIP3Q9NQ35 241 aa12.48□□□□□ -0.41
NUP50-209ENST00000432340 CCDC167Q9P0B6 97 aa12.48□□□□□ -0.41
NUP50-209ENST00000432340 B9D1Q9UPM9 204 aa12.48□□□□□ -0.41
NUP50-209ENST00000432340 HERC2O95714 4834 aa12.47□□□□□ -0.41
NUP50-209ENST00000432340 IGKV1D-17A0A075B6S4 117 aa12.47□□□□□ -0.41
NUP50-209ENST00000432340 RENP00797 406 aa12.47□□□□□ -0.41
NUP50-209ENST00000432340 CCL3L1P16619 93 aa12.47□□□□□ -0.41
NUP50-209ENST00000432340 NOS3P29474 1203 aa12.47□□□□□ -0.41
NUP50-209ENST00000432340 OTX1P32242 354 aaPredicted RBP12.47□□□□□ -0.41
NUP50-209ENST00000432340 TRAM2Q15035 370 aa12.47□□□□□ -0.41
NUP50-209ENST00000432340 DPP10Q8N608 796 aa12.47□□□□□ -0.41
NUP50-209ENST00000432340 ZNF671Q8TAW3 534 aa12.47□□□□□ -0.41
NUP50-209ENST00000432340 RPL3LQ92901 407 aaKnown RBP12.47□□□□□ -0.41
NUP50-209ENST00000432340 RNFT2Q96EX2 444 aa12.47□□□□□ -0.41
NUP50-209ENST00000432340 HIST1H2AAQ96QV6 131 aa12.47□□□□□ -0.41
NUP50-209ENST00000432340 OR52B2Q96RD2 323 aa12.47□□□□□ -0.41
NUP50-209ENST00000432340 LYSTQ99698 3801 aa12.47□□□□□ -0.41
NUP50-209ENST00000432340 RASL12Q9NYN1 266 aa12.47□□□□□ -0.41
NUP50-209ENST00000432340 ZNF222Q9UK12 451 aa12.47□□□□□ -0.41
NUP50-209ENST00000432340 N6AMT1Q9Y5N5 214 aa12.47□□□□□ -0.41
NUP50-209ENST00000432340 SASH3O75995 380 aa12.46□□□□□ -0.41
NUP50-209ENST00000432340 HTR1DP28221 377 aa12.46□□□□□ -0.41
NUP50-209ENST00000432340 FAM3AP98173 230 aa12.46□□□□□ -0.41
NUP50-209ENST00000432340 SNAPC1Q16533 368 aa12.46□□□□□ -0.41
NUP50-209ENST00000432340 VMACQ2NL98 169 aa12.46□□□□□ -0.41
NUP50-209ENST00000432340 SMIM21Q3B7S5 101 aa12.46□□□□□ -0.41
NUP50-209ENST00000432340 NANOGP8Q6NSW7 305 aa12.46□□□□□ -0.41
NUP50-209ENST00000432340 DLEU7Q6UYE1 221 aa12.46□□□□□ -0.41
NUP50-209ENST00000432340 DPY19L2P2Q6ZN68 376 aa12.46□□□□□ -0.41
NUP50-209ENST00000432340 MBOAT2Q6ZWT7 520 aa12.46□□□□□ -0.41
NUP50-209ENST00000432340 SLC16A9Q7RTY1 509 aa12.46□□□□□ -0.41
NUP50-209ENST00000432340 OFCC1Q8IZS5 231 aa12.46□□□□□ -0.41
NUP50-209ENST00000432340 BCAS4Q8TDM0 211 aa12.46□□□□□ -0.41
NUP50-209ENST00000432340 PAIP2Q9BPZ3 127 aaKnown RBP12.46□□□□□ -0.41
NUP50-209ENST00000432340 SPATA25Q9BR10 227 aa12.46□□□□□ -0.41
NUP50-209ENST00000432340 KAT8Q9H7Z6 458 aaKnown RBP12.46□□□□□ -0.41
NUP50-209ENST00000432340 SRA1Q9HD15 236 aaKnown RBP12.46□□□□□ -0.41
NUP50-209ENST00000432340 PAPOLBQ9NRJ5 636 aaKnown RBP12.46□□□□□ -0.41
NUP50-209ENST00000432340 DNAH7Q8WXX0 4024 aa12.46□□□□□ -0.42
NUP50-209ENST00000432340 HUWE1Q7Z6Z7 4374 aaKnown RBP12.46□□□□□ -0.42
NUP50-209ENST00000432340 TBX1O43435 398 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 TXNDC12O95881 172 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 APOC1P02654 83 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 TFF1P04155 84 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 ZNF728P0DKX0 622 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 TNFRSF1BP20333 461 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 SLC15A1P46059 708 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 GPR4P46093 362 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 OR1E2P47887 323 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 KIR2DS1Q14954 304 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 FAM76BQ5HYJ3 339 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 TEX38Q6PEX7 206 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 C18orf65Q6ZTR6 163 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 PTCHD4Q6ZW05 846 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 ZNF429Q86V71 674 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 FUNDC1Q8IVP5 155 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 OR4M1Q8NGD0 313 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 REEP6Q96HR9 211 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 TSSK2Q96PF2 358 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 CGREF1Q99674 301 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 KCNJ15Q99712 375 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 GON7Q9BXV9 100 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 RGCCQ9H4X1 137 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 DCLRE1BQ9H816 532 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 YY1AP1Q9H869 796 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 CHCHD3Q9NX63 227 aaKnown RBP12.45□□□□□ -0.42
NUP50-209ENST00000432340 IER3IP1Q9Y5U9 82 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 PCLOQ9Y6V0 5065 aa12.45□□□□□ -0.42
NUP50-209ENST00000432340 SERPINE3A8MV23 424 aa12.44□□□□□ -0.42
NUP50-209ENST00000432340 SLC22A2O15244 555 aa12.44□□□□□ -0.42
NUP50-209ENST00000432340 MTRF1O75570 445 aaKnown RBP12.44□□□□□ -0.42
NUP50-209ENST00000432340 CDKN2AP42771 156 aaKnown RBP12.44□□□□□ -0.42
NUP50-209ENST00000432340 MTPNP58546 118 aa12.44□□□□□ -0.42
NUP50-209ENST00000432340 ZNF273Q14593 569 aa12.44□□□□□ -0.42
NUP50-209ENST00000432340 KRT77Q7Z794 578 aa12.44□□□□□ -0.42
NUP50-209ENST00000432340 FOXRED2Q8IWF2 684 aa12.44□□□□□ -0.42
NUP50-209ENST00000432340 CREB3L1Q96BA8 519 aa12.44□□□□□ -0.42
NUP50-209ENST00000432340 RNF170Q96K19 258 aa12.44□□□□□ -0.42
NUP50-209ENST00000432340 C16orf45Q96MC5 204 aaPredicted RBP12.44□□□□□ -0.42
NUP50-209ENST00000432340 DUX3Q96PT4 197 aa12.44□□□□□ -0.42
NUP50-209ENST00000432340 RABEP2Q9H5N1 569 aa12.44□□□□□ -0.42
NUP50-209ENST00000432340 TBC1D23Q9NUY8 699 aa12.44□□□□□ -0.42
NUP50-209ENST00000432340 RHBDD3Q9Y3P4 386 aa12.44□□□□□ -0.42
NUP50-209ENST00000432340 DCTN6O00399 190 aa12.43□□□□□ -0.42
NUP50-209ENST00000432340 CDC42EP2O14613 210 aa12.43□□□□□ -0.42
NUP50-209ENST00000432340 SNNO75324 88 aaPredicted RBP12.43□□□□□ -0.42
NUP50-209ENST00000432340 SNRNP70P08621 437 aaKnown RBP12.43□□□□□ -0.42
NUP50-209ENST00000432340 PRKXP51817 358 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms