RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 APOA2P02652 100 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 GRPP07492 148 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 RPS25P62851 125 aaKnown RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 KIR2DS5Q14953 304 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 TCTEX1D4Q5JR98 221 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 MRPL14Q6P1L8 145 aaKnown RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 SLC27A1Q6PCB7 646 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 ZNF605Q86T29 641 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 XYLT1Q86Y38 959 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 PIP4P2Q8N4L2 257 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 OR4C13Q8NGP0 309 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 WIPF2Q8TF74 440 aaPredicted RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 LCN9Q8WX39 176 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 GPKOWQ92917 476 aaPredicted RBP eCLIP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 ZG16BQ96DA0 208 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 PCED1BQ96HM7 432 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 DMAC2Q9NW81 257 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 WSB2Q9NYS7 404 aaPredicted RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 GNG12Q9UBI6 72 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 ZNF214Q9UL59 606 aaPredicted RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 EMC9Q9Y3B6 208 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 WASHC3Q9Y3C0 194 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 CDC42BPAQ5VT25 1732 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 A0A087WUJ7 227 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 TRAV39A0A0B4J263 110 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 H3BQ15 152 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 H7C1C5 153 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 PPIHO43447 177 aaKnown RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 SNAI1O95863 264 aaPredicted RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 BCKDHAP12694 445 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 PAX1P15863 534 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 MALP21145 153 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 FOXA1P55317 472 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 LCN6P62502 163 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 CD69Q07108 199 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 SLC10A2Q12908 348 aaPredicted RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 ENDOGQ14249 297 aaKnown RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 LRRC37A5PQ49AS3 106 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 LRRC10Q5BKY1 277 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 MEIG1Q5JSS6 88 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 C6orf136Q5SQH8 315 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 CD200R1LQ6Q8B3 271 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 RPTNQ6XPR3 784 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 GLDNQ6ZMI3 551 aaPredicted RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 CTU1Q7Z7A3 348 aaKnown RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 CALHM3Q86XJ0 350 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 ZFP62Q8NB50 900 aaPredicted RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 OR5D16Q8NGK9 328 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 OR1S1Q8NH92 325 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 CASTOR1Q8WTX7 329 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 RAD54LQ92698 747 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 EMG1Q92979 244 aaKnown RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 SLCO4A1Q96BD0 722 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 MRGPRX3Q96LB0 322 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 ZNF300Q96RE9 604 aaPredicted RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 SDHCQ99643 169 aaPredicted RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 SAMD10Q9BYL1 202 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 SLC25A10Q9UBX3 287 aaPredicted RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 FBXL7Q9UJT9 491 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 KCNS2Q9ULS6 477 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 ZNF638Q14966 1978 aaKnown RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 TNRC6AQ8NDV7 1962 aaKnown RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 MLH3Q9UHC1 1453 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 TRAV24A0A0B4J272 114 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 IGHV2OR16-5A0A0B4J2B6 119 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 FCGR3BO75015 233 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 WNT11O96014 354 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 IL2RAP01589 272 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 SBK3P0C264 359 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 SMIM10L1P0DMW3 83 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 FGF5P12034 268 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 SEC61A1P61619 476 aaKnown RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 TBPL2Q6SJ96 375 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 CBLN3Q6UW01 205 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 LINC00116Q8NCU8 138 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 JOSD2Q8TAC2 188 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 ZNF502Q8TBZ5 544 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 UPRTQ96BW1 309 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 MRPL53Q96EL3 112 aaKnown RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 SMIM10Q96HG1 83 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 DUX3Q96PT4 197 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 C20orf144Q9BQM9 153 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 SNRNP25Q9BV90 132 aaKnown RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 POLR2J3Q9H1A7 115 aaKnown RBP4.75□□□□□ -1.65
PTPN4-203ENST00000430976 SFXN1Q9H9B4 322 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 BPIFA1Q9NP55 256 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 TRIP11Q15643 1979 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 ADAMTS13Q76LX8 1427 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 PTPRUQ92729 1446 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 MYO9BQ13459 2157 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 A0A1B0GV50 99 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 FAM90A18PA6NE21 464 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 FAM90A16PA6NEW6 464 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 FAM90A9PA6NNJ1 464 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 FAM90A5PA8MXJ8 464 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 E9PQ18 207 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 K7ESF4 209 aa4.75□□□□□ -1.65
PTPN4-203ENST00000430976 FAM189A1O60320 539 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms