RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 ZNF529Q6P280 563 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 CRIP3Q6Q6R5 217 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 MOGAT3Q86VF5 341 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 COMMD2Q86X83 199 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 ZNF676Q8N7Q3 588 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 OR1M1Q8NGA1 313 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 ZNF420Q8TAQ5 688 aaPredicted RBP10.46□□□□□ -0.73
USP40-205ENST00000430158 GHSRQ92847 366 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 ERGIC1Q969X5 290 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 MND1Q9BWT6 205 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 REG4Q9BYZ8 158 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 BPESC1Q9GZL8 116 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 CHST5Q9GZS9 411 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 ABCB9Q9NP78 766 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 TRIM36Q9NQ86 728 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 TMEM106BQ9NUM4 274 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 TREM2Q9NZC2 230 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 IGHV4-61A0A0C4DH41 118 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 IGKV1-9A0A0C4DH69 117 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 PQLC2LA1A4F0 135 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 TMEM178BH3BS89 294 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 MYL12BO14950 172 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 TPD52L2O43399 206 aaKnown RBP10.45□□□□□ -0.74
USP40-205ENST00000430158 NRASP01111 189 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 LHBP01229 141 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 SLC25A16P16260 332 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 PCMT1P22061 227 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 GNALP38405 381 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 CDH15P55291 814 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 HOXA4Q00056 320 aaPredicted RBP10.45□□□□□ -0.74
USP40-205ENST00000430158 EMX1Q04741 257 aaPredicted RBP10.45□□□□□ -0.74
USP40-205ENST00000430158 TPBGQ13641 420 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 TBCEQ15813 527 aaPredicted RBP10.45□□□□□ -0.74
USP40-205ENST00000430158 ZNF826PQ6ZT77 177 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 UTS2BQ765I0 119 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 ZDHHC23Q8IYP9 409 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 FTMTQ8N4E7 242 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 PARP16Q8N5Y8 322 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 OR5A2Q8NGI9 324 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 FGGYQ96C11 551 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 COX4I2Q96KJ9 171 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 OR51I2Q9H344 312 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 ISYNA1Q9NPH2 558 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 ACOT13Q9NPJ3 140 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 GPR173Q9NS66 373 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 BLOC1S6Q9UL45 172 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 PPP1R3CQ9UQK1 317 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 ZNF281Q9Y2X9 895 aa10.45□□□□□ -0.74
USP40-205ENST00000430158 IGKV1-27A0A075B6S5 117 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.44□□□□□ -0.74
USP40-205ENST00000430158 ANKRD61A6NGH8 418 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.44□□□□□ -0.74
USP40-205ENST00000430158 H7C1Q1 480 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 IFNL4K9M1U5 179 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 ALX3O95076 343 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 FSTL3O95633 263 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 IGHV2-70P01814 119 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 RPSAP08865 295 aaKnown RBP10.44□□□□□ -0.74
USP40-205ENST00000430158 ZNF12P17014 697 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 TAS2R43P59537 309 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 KRTAP1-1Q07627 177 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 SLC3A1Q07837 685 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 LOXL1Q08397 574 aaPredicted RBP10.44□□□□□ -0.74
USP40-205ENST00000430158 HFEQ30201 348 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 KCTD21Q4G0X4 260 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 CEP78Q5JTW2 689 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 MOB3CQ70IA8 216 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 RNF144BQ7Z419 303 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 SPARTQ8N0X7 666 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 OR13C5Q8NGS8 318 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 OR8S1Q8NH09 359 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 CCL17Q92583 94 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 RNF170Q96K19 258 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 OPALINQ96PE5 141 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 MICU1Q9BPX6 476 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 RTL8AQ9BWD3 113 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 UFSP2Q9NUQ7 469 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 C14orf119Q9NWQ9 140 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 WIPI2Q9Y4P8 454 aa10.44□□□□□ -0.74
USP40-205ENST00000430158 HIVEP2P31629 2446 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 FN1P02751 2386 aaKnown RBP10.43□□□□□ -0.74
USP40-205ENST00000430158 TRBV5-7A0A0A0MS05 114 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 OR5B21A6NL26 309 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 TMEM210A6NLX4 147 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 ANXA2P2A6NMY6 339 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 ZNF732B4DXR9 585 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 TNFRSF13BO14836 293 aaPredicted RBP10.43□□□□□ -0.74
USP40-205ENST00000430158 PIN1P1O15428 100 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 CELP19835 753 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 MPZP25189 248 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 GPR6P46095 362 aaPredicted RBP10.43□□□□□ -0.74
USP40-205ENST00000430158 GPM6AP51674 278 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 GP2P55259 537 aaKnown RBP10.43□□□□□ -0.74
USP40-205ENST00000430158 LMO4P61968 165 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 GNG3P63215 75 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 MZT1Q08AG7 82 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 GPR50Q13585 617 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 ZMYND11Q15326 602 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 CARTPTQ16568 116 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 FAM201AQ5SY85 155 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms