RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 CSF1P09603 554 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 OR8U8P0C7N1 319 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 APOBEC3AP31941 199 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-206ENST00000428680 RPL31P62899 125 aaKnown RBP6.39□□□□□ -1.39
CNOT4-206ENST00000428680 FAM76BQ5HYJ3 339 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 KRBOX4Q5JUW0 171 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 DHRS7BQ6IAN0 325 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-206ENST00000428680 PLPP7Q8NBV4 271 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 SLC25A40Q8TBP6 338 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 ADAMTS17Q8TE56 1095 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 PP6455Q8WZ26 134 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 PELI1Q96FA3 418 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 SPACA5Q96QH8 159 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 SIGLEC11Q96RL6 698 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 UCN2Q96RP3 112 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 ARPC5LQ9BPX5 153 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 NMES1Q9C002 83 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 CGGBP1Q9UFW8 167 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-206ENST00000428680 EMCNQ9ULC0 261 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 DOCK7Q96N67 2140 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 NKX2-6A6NCS4 301 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 E9PI62 339 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 GAPDHSO14556 408 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-206ENST00000428680 GNB3P16520 340 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 MRPS10P82664 201 aaKnown RBP6.39□□□□□ -1.39
CNOT4-206ENST00000428680 ZNF616Q08AN1 781 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 ZFP69Q49AA0 526 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 ZNF787Q6DD87 383 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 MDP1Q86V88 176 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 CATSPERDQ86XM0 798 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 Q8N402 240 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 OR1M1Q8NGA1 313 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 ZNF596Q8TC21 504 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 SLC7A13Q8TCU3 470 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 MARVELD3Q96A59 401 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 TMEM56Q96MV1 263 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 PBOV1Q9GZY1 135 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 SLC25A31Q9H0C2 315 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 SIRT3Q9NTG7 399 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-206ENST00000428680 LRRK2Q5S007 2527 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 IGKV3-7A0A075B6H7 116 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 RPS10-NUDT3A0A1W2PQS6 291 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 HSD17B6O14756 317 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 NDUFA2O43678 99 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 CEACAM4O75871 244 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 HRASP01112 189 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 COX6A1P12074 109 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 ALDH3B1P43353 468 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 CLDN20P56880 219 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 HBG1P69891 147 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 HBG2P69892 147 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 FAM27E3Q08E93 113 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 LY6EQ16553 131 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 RNF220Q5VTB9 566 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 ZNF788Q6ZQV5 615 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 ST6GALNAC3Q8NDV1 305 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 OR52L2PQ8NGH6 319 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 NEU4Q8WWR8 484 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-206ENST00000428680 SORT1Q99523 831 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 SEBOXQ9HB31 216 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-206ENST00000428680 ZNF407Q9C0G0 2248 aa6.39□□□□□ -1.39
CNOT4-206ENST00000428680 RER1O15258 196 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 SULT1C4O75897 302 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 HOXB5P09067 269 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 CT45A10P0DMU9 189 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 PRPH2P23942 346 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 TNK1Q13470 666 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 TOMM34Q15785 309 aaPredicted RBP6.38□□□□□ -1.39
CNOT4-206ENST00000428680 ZNF74Q16587 644 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 ATPAF1Q5TC12 328 aaPredicted RBP6.38□□□□□ -1.39
CNOT4-206ENST00000428680 OTPQ5XKR4 325 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 FAHD1Q6P587 224 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 IL34Q6ZMJ4 242 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 RBPMS2Q6ZRY4 209 aaKnown RBP6.38□□□□□ -1.39
CNOT4-206ENST00000428680 TGIF2LYQ8IUE0 185 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 TGIF2LXQ8IUE1 241 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 OR4C13Q8NGP0 309 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 SPSB2Q99619 263 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 IKZF5Q9H5V7 419 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 UNKLQ9H9P5 680 aaKnown RBP6.38□□□□□ -1.39
CNOT4-206ENST00000428680 NECAP2Q9NVZ3 263 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 ZMAT5Q9UDW3 170 aaKnown RBP6.38□□□□□ -1.39
CNOT4-206ENST00000428680 RAB22AQ9UL26 194 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 SPEGQ15772 3267 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 SSX5O60225 188 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 CT62P0C5K7 136 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 AKAIN1P0CW23 69 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 TUBG1P23258 451 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 SELENOPP49908 381 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 RAB7AP51149 207 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 TSPO2Q5TGU0 170 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 WDR88Q6ZMY6 472 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 KLHDC8BQ8IXV7 354 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 OR4M1Q8NGD0 313 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 OR10V1Q8NGI7 309 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 NANPQ8TBE9 248 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 TSNAXQ99598 290 aaKnown RBP6.38□□□□□ -1.39
CNOT4-206ENST00000428680 ZNF649Q9BS31 505 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 C1QTNF3Q9BXJ4 246 aa6.38□□□□□ -1.39
CNOT4-206ENST00000428680 SLC38A1Q9H2H9 487 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms