RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 FOXD3Q9UJU5 478 aaPredicted RBP10.17□□□□□ -0.78
FIRRE-201ENST00000427391 TNFSF18Q9UNG2 199 aa10.17□□□□□ -0.78
FIRRE-201ENST00000427391 PCSK5Q92824 1860 aa10.17□□□□□ -0.78
FIRRE-201ENST00000427391 A0A087WZY1 265 aa10.17□□□□□ -0.78
FIRRE-201ENST00000427391 PINLYPA6NC86 204 aa10.17□□□□□ -0.78
FIRRE-201ENST00000427391 CHRM2P08172 466 aa10.17□□□□□ -0.78
FIRRE-201ENST00000427391 B3GALT5-AS1P59052 145 aa10.17□□□□□ -0.78
FIRRE-201ENST00000427391 RPS27AP62979 156 aaKnown RBP10.17□□□□□ -0.78
FIRRE-201ENST00000427391 ANKRD39Q53RE8 183 aa10.17□□□□□ -0.78
FIRRE-201ENST00000427391 NKAPLQ5M9Q1 402 aa10.17□□□□□ -0.78
FIRRE-201ENST00000427391 SLC51BQ86UW2 128 aa10.17□□□□□ -0.78
FIRRE-201ENST00000427391 ZDHHC22Q8N966 263 aa10.17□□□□□ -0.78
FIRRE-201ENST00000427391 SGK3Q96BR1 496 aa10.17□□□□□ -0.78
FIRRE-201ENST00000427391 ZNF701Q9NV72 531 aaPredicted RBP10.17□□□□□ -0.78
FIRRE-201ENST00000427391 KIAA1549Q9HCM3 1950 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 DHRS3O75911 302 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 TCN2P20062 427 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 GLRA1P23415 457 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 ARHGDIBP52566 201 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 CSNK2A1P68400 391 aaPredicted RBP10.16□□□□□ -0.78
FIRRE-201ENST00000427391 OR2W3Q7Z3T1 314 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 C20orf196Q8IYI0 205 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 CSNK2A3Q8NEV1 391 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 DYRK2Q92630 601 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 MARVELD3Q96A59 401 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 ZNF845Q96IR2 970 aaPredicted RBP10.16□□□□□ -0.78
FIRRE-201ENST00000427391 SPEF1Q9Y4P9 236 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 MED13Q9UHV7 2174 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 CCDC163A0A0D9SF12 145 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 NUPL2O15504 423 aaKnown RBP10.16□□□□□ -0.78
FIRRE-201ENST00000427391 EIF1BO60739 113 aaKnown RBP10.16□□□□□ -0.78
FIRRE-201ENST00000427391 CBR3O75828 277 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 GSTP1P09211 210 aaKnown RBP10.16□□□□□ -0.78
FIRRE-201ENST00000427391 SNU13P55769 128 aaKnown RBP10.16□□□□□ -0.78
FIRRE-201ENST00000427391 RAC1P63000 192 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 ECH1Q13011 328 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 PDCD1Q15116 288 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 PXDC1Q5TGL8 231 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 ELP2Q6IA86 826 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 GALNTL5Q7Z4T8 443 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 OR56B1Q8NGI3 324 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 PIGQQ9BRB3 760 aa10.16□□□□□ -0.78
FIRRE-201ENST00000427391 MCTS1Q9ULC4 181 aaKnown RBP10.16□□□□□ -0.78
FIRRE-201ENST00000427391 SHANK1Q9Y566 2161 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 RIF1Q5UIP0 2472 aaKnown RBP10.15□□□□□ -0.78
FIRRE-201ENST00000427391 FAM230AA0A1W2PPH8 454 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 MSTNO14793 375 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 IGLV3-1P01715 115 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 PRF1P14222 555 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 CLDN15P56746 228 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 SUPT4H1P63272 117 aaKnown RBP10.15□□□□□ -0.78
FIRRE-201ENST00000427391 ANKRD55Q3KP44 614 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 GGNQ86UU5 652 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 PDZD9Q8IXQ8 264 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 KCNRGQ8N5I3 272 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 OR5H2Q8NGV7 314 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 NAA11Q9BSU3 229 aaPredicted RBP10.15□□□□□ -0.78
FIRRE-201ENST00000427391 URM1Q9BTM9 101 aaKnown RBP10.15□□□□□ -0.78
FIRRE-201ENST00000427391 PECRQ9BY49 303 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 EHFQ9NZC4 300 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 FLVCR1Q9Y5Y0 555 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 LRRC3CA6NJW4 275 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 DUS4LO95620 317 aaKnown RBP10.15□□□□□ -0.78
FIRRE-201ENST00000427391 CTRB1P17538 263 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 HOXA6P31267 233 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 CBX5P45973 191 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 CARD18P57730 90 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 C9orf135Q5VTT2 229 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 CTRB2Q6GPI1 263 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 SLC23A3Q6PIS1 610 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 CLEC18BQ6UXF7 455 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 PNLDC1Q8NA58 520 aaKnown RBP10.15□□□□□ -0.78
FIRRE-201ENST00000427391 ABHD3Q8WU67 409 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 RRNAD1Q96FB5 475 aaKnown RBP10.15□□□□□ -0.78
FIRRE-201ENST00000427391 CHST5Q9GZS9 411 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 TCFL5Q9UL49 500 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 GPR132Q9UNW8 380 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 CSAG2Q9Y5P2 127 aa10.15□□□□□ -0.78
FIRRE-201ENST00000427391 LAMA5O15230 3695 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 IGKV1-27A0A075B6S5 117 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 KANTRA0A1W2PQU2 76 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 FAM221AA4D161 298 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 H0YIZ8 118 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 SGCEO43556 437 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 CER1O95813 267 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 KNG1P01042 644 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 LCATP04180 440 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 P04436 131 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 TMEM225BP0DP42 221 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 ZNF32P17041 273 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 MPZP25189 248 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 CTSSP25774 331 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 CALCRP30988 508 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 OTX1P32242 354 aaPredicted RBP10.14□□□□□ -0.79
FIRRE-201ENST00000427391 NUP62P37198 522 aaPredicted RBP10.14□□□□□ -0.79
FIRRE-201ENST00000427391 OR3A2P47893 321 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 RRADP55042 308 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 BTN1A1Q13410 526 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 AADACL3Q5VUY0 350 aa10.14□□□□□ -0.79
FIRRE-201ENST00000427391 SPINK14Q6IE38 97 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms