RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 FLOT2Q14254 428 aa17.12■□□□□ 0.33
UBXN4-204ENST00000426921 DNAL1Q4LDG9 190 aa17.12■□□□□ 0.33
UBXN4-204ENST00000426921 KRT77Q7Z794 578 aa17.12■□□□□ 0.33
UBXN4-204ENST00000426921 Q8N7P7 452 aa17.12■□□□□ 0.33
UBXN4-204ENST00000426921 PIGCQ92535 297 aa17.12■□□□□ 0.33
UBXN4-204ENST00000426921 RNF170Q96K19 258 aa17.12■□□□□ 0.33
UBXN4-204ENST00000426921 GAFA1Q96PS6 74 aa17.12■□□□□ 0.33
UBXN4-204ENST00000426921 CITED1Q99966 193 aa17.12■□□□□ 0.33
UBXN4-204ENST00000426921 TEX12Q9BXU0 123 aa17.12■□□□□ 0.33
UBXN4-204ENST00000426921 CCDC182A6NF36 153 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 SIGLEC5O15389 551 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 KCNAB3O43448 404 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 AKR7A2O43488 359 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 GPR137BO60478 399 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 ATP6V1B1P15313 513 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 CAV3P56539 151 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 GUCA2AQ02747 115 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 ROM1Q03395 351 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 APOFQ13790 326 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 TMEM236Q5W0B7 351 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 KCTD18Q6PI47 426 aaPredicted RBP17.11■□□□□ 0.33
UBXN4-204ENST00000426921 C1orf122Q6ZSJ8 110 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 KCTD8Q6ZWB6 473 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 TRPM8Q7Z2W7 1104 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 SPATA24Q86W54 205 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 OR5T2Q8NGG2 359 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 NRBF2Q96F24 287 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 MED30Q96HR3 178 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 ZNRD1Q9P1U0 126 aa17.11■□□□□ 0.33
UBXN4-204ENST00000426921 RNASEK-C17orf49H0YIS7 233 aa17.1■□□□□ 0.33
UBXN4-204ENST00000426921 MAP2K3P46734 347 aa17.1■□□□□ 0.33
UBXN4-204ENST00000426921 GNG3P63215 75 aa17.1■□□□□ 0.33
UBXN4-204ENST00000426921 DGUOKQ16854 277 aa17.1■□□□□ 0.33
UBXN4-204ENST00000426921 FAHD1Q6P587 224 aa17.1■□□□□ 0.33
UBXN4-204ENST00000426921 C17orf107Q6ZR85 190 aa17.1■□□□□ 0.33
UBXN4-204ENST00000426921 PDZD9Q8IXQ8 264 aa17.1■□□□□ 0.33
UBXN4-204ENST00000426921 LRTOMTQ8WZ04 291 aa17.1■□□□□ 0.33
UBXN4-204ENST00000426921 TNFRSF14Q92956 283 aa17.1■□□□□ 0.33
UBXN4-204ENST00000426921 TEAD3Q99594 435 aa17.1■□□□□ 0.33
UBXN4-204ENST00000426921 OR51I2Q9H344 312 aa17.1■□□□□ 0.33
UBXN4-204ENST00000426921 DPAGT1Q9H3H5 408 aa17.1■□□□□ 0.33
UBXN4-204ENST00000426921 SIRT7Q9NRC8 400 aa17.1■□□□□ 0.33
UBXN4-204ENST00000426921 SNTG1Q9NSN8 517 aa17.1■□□□□ 0.33
UBXN4-204ENST00000426921 NLKQ9UBE8 527 aa17.1■□□□□ 0.33
UBXN4-204ENST00000426921 SLC25A10Q9UBX3 287 aaPredicted RBP17.1■□□□□ 0.33
UBXN4-204ENST00000426921 POMPQ9Y244 141 aa17.1■□□□□ 0.33
UBXN4-204ENST00000426921 CAB39Q9Y376 341 aaPredicted RBP17.1■□□□□ 0.33
UBXN4-204ENST00000426921 TMEM269A0A1B0GVZ9 245 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 PRR32B1ATL7 298 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 M0R1W7 72 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 GYG2O15488 501 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 ZNF254O75437 659 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 ACAA1P09110 424 aaPredicted RBP17.09■□□□□ 0.33
UBXN4-204ENST00000426921 FBP1P09467 338 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 GPM6AP51674 278 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 HCCSP53701 268 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 GMFBP60983 142 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 SRSF4Q08170 494 aaKnown RBP17.09■□□□□ 0.33
UBXN4-204ENST00000426921 SNAPC1Q16533 368 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 CEACAM21Q3KPI0 293 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 ZBTB37Q5TC79 503 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 LCN1P1Q5VSP4 162 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 FAM81AQ8TBF8 368 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 SLC7A6OSQ96CW6 309 aaPredicted RBP17.09■□□□□ 0.33
UBXN4-204ENST00000426921 HIST1H2AAQ96QV6 131 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 OR8B4Q96RC9 309 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 MROQ9BYG7 248 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 PAPOLBQ9NRJ5 636 aaKnown RBP17.09■□□□□ 0.33
UBXN4-204ENST00000426921 NUFIP1Q9UHK0 495 aaKnown RBP17.09■□□□□ 0.33
UBXN4-204ENST00000426921 ZNF222Q9UK12 451 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 TMEM14AQ9Y6G1 99 aa17.09■□□□□ 0.33
UBXN4-204ENST00000426921 OR5B21A6NL26 309 aa17.08■□□□□ 0.32
UBXN4-204ENST00000426921 OR2AT4A6NND4 320 aa17.08■□□□□ 0.32
UBXN4-204ENST00000426921 RHBDL1O75783 438 aa17.08■□□□□ 0.32
UBXN4-204ENST00000426921 GLRA1P23415 457 aa17.08■□□□□ 0.32
UBXN4-204ENST00000426921 CRISP1P54107 249 aa17.08■□□□□ 0.32
UBXN4-204ENST00000426921 TAF9Q16594 264 aa17.08■□□□□ 0.32
UBXN4-204ENST00000426921 GDPGP1Q6ZNW5 385 aa17.08■□□□□ 0.32
UBXN4-204ENST00000426921 ZNF679Q8IYX0 411 aa17.08■□□□□ 0.32
UBXN4-204ENST00000426921 LINC01006Q8NI28 216 aa17.08■□□□□ 0.32
UBXN4-204ENST00000426921 ASB17Q8WXJ9 295 aa17.08■□□□□ 0.32
UBXN4-204ENST00000426921 H1FXQ92522 213 aaKnown RBP17.08■□□□□ 0.32
UBXN4-204ENST00000426921 PBOV1Q9GZY1 135 aa17.08■□□□□ 0.32
UBXN4-204ENST00000426921 TVP23BQ9NYZ1 205 aa17.08■□□□□ 0.32
UBXN4-204ENST00000426921 COPS3Q9UNS2 423 aa17.08■□□□□ 0.32
UBXN4-204ENST00000426921 FAM96BQ9Y3D0 163 aa17.08■□□□□ 0.32
UBXN4-204ENST00000426921 IGKV1D-17A0A075B6S4 117 aa17.07■□□□□ 0.32
UBXN4-204ENST00000426921 ZNF732B4DXR9 585 aa17.07■□□□□ 0.32
UBXN4-204ENST00000426921 NPFFO15130 113 aa17.07■□□□□ 0.32
UBXN4-204ENST00000426921 CLPXO76031 633 aa17.07■□□□□ 0.32
UBXN4-204ENST00000426921 TFF1P04155 84 aa17.07■□□□□ 0.32
UBXN4-204ENST00000426921 EEF1B2P24534 225 aaKnown RBP17.07■□□□□ 0.32
UBXN4-204ENST00000426921 ZNF829Q3KNS6 432 aaPredicted RBP17.07■□□□□ 0.32
UBXN4-204ENST00000426921 CEP78Q5JTW2 689 aa17.07■□□□□ 0.32
UBXN4-204ENST00000426921 BRICD5Q6PL45 260 aa17.07■□□□□ 0.32
UBXN4-204ENST00000426921 ZSCAN4Q8NAM6 433 aaPredicted RBP17.07■□□□□ 0.32
UBXN4-204ENST00000426921 OR5A2Q8NGI9 324 aa17.07■□□□□ 0.32
UBXN4-204ENST00000426921 AQP3Q92482 292 aa17.07■□□□□ 0.32
UBXN4-204ENST00000426921 UTP4Q969X6 686 aaKnown RBP17.07■□□□□ 0.32
UBXN4-204ENST00000426921 SEMA6AQ9H2E6 1030 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms