RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 C9orf170A2RU37 121 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 GPR31O00270 319 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 ISG15P05161 165 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 HNF1AP20823 631 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 CNR1P21554 472 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 MMP16P51512 607 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 MC2RQ01718 297 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 SRSF4Q08170 494 aaKnown RBP11.46□□□□□ -0.57
COL12A1-205ENST00000425443 ANGPTL5Q86XS5 388 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 NAXEQ8NCW5 288 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 IFI44Q8TCB0 444 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 GPER1Q99527 375 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 TMEM231Q9H6L2 316 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 A6NJY4 79 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 CASRP41180 1078 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 PRSS12P56730 875 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 C1orf100Q5SVJ3 147 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 ZNF813Q6ZN06 617 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 SLC25A42Q86VD7 318 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 ZNF775Q96BV0 537 aaPredicted RBP11.46□□□□□ -0.57
COL12A1-205ENST00000425443 MRPL37Q9BZE1 423 aaKnown RBP11.46□□□□□ -0.57
COL12A1-205ENST00000425443 METTL9Q9H1A3 318 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 KCNK7Q9Y2U2 307 aa11.46□□□□□ -0.57
COL12A1-205ENST00000425443 A0A0D9SG52 128 aa11.46□□□□□ -0.58
COL12A1-205ENST00000425443 G3V3Y1 287 aa11.46□□□□□ -0.58
COL12A1-205ENST00000425443 H7C1Q1 480 aa11.46□□□□□ -0.58
COL12A1-205ENST00000425443 TLX3O43711 291 aaPredicted RBP11.46□□□□□ -0.58
COL12A1-205ENST00000425443 SNAPC5O75971 98 aa11.46□□□□□ -0.58
COL12A1-205ENST00000425443 STK17BO94768 372 aa11.46□□□□□ -0.58
COL12A1-205ENST00000425443 ERCC1P07992 297 aaPredicted RBP11.46□□□□□ -0.58
COL12A1-205ENST00000425443 ZNF25P17030 456 aaPredicted RBP11.46□□□□□ -0.58
COL12A1-205ENST00000425443 RAB4BP61018 213 aa11.46□□□□□ -0.58
COL12A1-205ENST00000425443 QRFPP83859 136 aa11.46□□□□□ -0.58
COL12A1-205ENST00000425443 CDPF1Q6NVV7 123 aa11.46□□□□□ -0.58
COL12A1-205ENST00000425443 LYG2Q86SG7 212 aa11.46□□□□□ -0.58
COL12A1-205ENST00000425443 CPNE2Q96FN4 548 aaPredicted RBP11.46□□□□□ -0.58
COL12A1-205ENST00000425443 CLUHP3Q96NS8 147 aa11.46□□□□□ -0.58
COL12A1-205ENST00000425443 PRO1933Q9H354 126 aa11.46□□□□□ -0.58
COL12A1-205ENST00000425443 MYOZ1Q9NP98 299 aaPredicted RBP11.46□□□□□ -0.58
COL12A1-205ENST00000425443 PTRH2Q9Y3E5 179 aaKnown RBP11.46□□□□□ -0.58
COL12A1-205ENST00000425443 KANTRA0A1W2PQU2 76 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 MPTX1A8MV57 137 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 RER1O15258 196 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 RAMP1O60894 148 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 TTRP02766 147 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 VSIG8P0DPA2 414 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 SLC25A4P12235 298 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 TAGLN2P37802 199 aaKnown RBP11.45□□□□□ -0.58
COL12A1-205ENST00000425443 GALNTL5Q7Z4T8 443 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 NAA40Q86UY6 237 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 FOXRED2Q8IWF2 684 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 TMEM104Q8NE00 496 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 NOXO1Q8NFA2 376 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 OR2M3Q8NG83 312 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 MARCH1Q8TCQ1 289 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 EDAQ92838 391 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 SLAMF9Q96A28 289 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 RRNAD1Q96FB5 475 aaKnown RBP11.45□□□□□ -0.58
COL12A1-205ENST00000425443 ELL3Q9HB65 397 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-205ENST00000425443 RPH3ALQ9UNE2 315 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 A0A0A6YYD4 124 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 NPIPB13A6NJU9 1138 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 NUDT19A8MXV4 375 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 NPIPB4C9JG80 1138 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 ZNF878C9JN71 531 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 F5H0A9 414 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-205ENST00000425443 FABP9Q0Z7S8 132 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 GUCA2BQ16661 112 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 RNF212Q495C1 297 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 TMEM156Q8N614 296 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 ZNF283Q8N7M2 679 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 OR10S1Q8NGN2 331 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 FAM206AQ9NX38 181 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 B3GAT1Q9P2W7 334 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 RAB22AQ9UL26 194 aa11.45□□□□□ -0.58
COL12A1-205ENST00000425443 DISC1C4P0D8 188 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 C9J4A7 227 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 IL2RAP01589 272 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 CELA2AP08217 269 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 NPY4RP50391 375 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 ZNF345Q14585 488 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 SLC9A3R2Q15599 337 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 PCK2Q16822 640 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 TMEM95Q3KNT9 176 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 RAET1LQ5VY80 246 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 SLC22A24Q8N4F4 322 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 SLCO5A1Q9H2Y9 848 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 ASCL3Q9NQ33 180 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 KLHL13Q9P2N7 655 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 TMEM265A0A087WTH1 108 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 LY6G6EA0A0G2JKS1 128 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 A0A1W2PNV4 684 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 EFSO43281 561 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 AGTR1P30556 359 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 ZNF93P35789 620 aaPredicted RBP11.44□□□□□ -0.58
COL12A1-205ENST00000425443 CLDN17P56750 224 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 RAB12Q6IQ22 244 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 ACOT7LQ6ZUV0 252 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 MITD1Q8WV92 249 aa11.44□□□□□ -0.58
COL12A1-205ENST00000425443 ASF1BQ9NVP2 202 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms