RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 RAC2P15153 192 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 DNASE1P24855 282 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 CDK2P24941 298 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 BAK1Q16611 211 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 FAM208BQ5VWN6 2430 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 LHFPL2Q6ZUX7 228 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 UXS1Q8NBZ7 420 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 OR2AE1Q8NHA4 323 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 SPSB1Q96BD6 273 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 HAVCR1Q96D42 359 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 UQCC2Q9BRT2 126 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 CHMP1AQ9HD42 196 aaPredicted RBP6.3□□□□□ -1.4
LSM8-204ENST00000424702 A0A1W2PPH5 198 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 CSF1P09603 554 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 FSTP19883 344 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 GDNFP39905 211 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 VEGFCP49767 419 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 EIF2B2P49770 351 aaKnown RBP6.3□□□□□ -1.4
LSM8-204ENST00000424702 RBP2P50120 134 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 TAS2R20P59543 309 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 OXA1LQ15070 435 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 HIST3H3Q16695 136 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 C21orf62-AS1Q17RA5 79 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 PRSS45Q7RTY3 260 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 OR56B1Q8NGI3 324 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 PPP1R14BQ96C90 147 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 DMRTA2Q96SC8 542 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 SCP2D1Q9UJQ7 156 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 PLEKHA6Q9Y2H5 1048 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 FAM215AQ9Y5M1 114 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 V9GYH0 126 aa6.3□□□□□ -1.4
LSM8-204ENST00000424702 A0A0U1RQV5 110 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 B9A039 149 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 GABARAPH6UMI1 98 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 SC5DO75845 299 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 CSN2P05814 226 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 CHRM2P08172 466 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 ASAH1Q13510 395 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 C20orf204Q6ZNR8 217 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 OR51A2Q8NGJ7 313 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 ZNF837Q96EG3 531 aaPredicted RBP6.29□□□□□ -1.4
LSM8-204ENST00000424702 RNF170Q96K19 258 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 C11orf54Q9H0W9 315 aaPredicted RBP6.29□□□□□ -1.4
LSM8-204ENST00000424702 RBFOX1Q9NWB1 397 aaKnown RBP6.29□□□□□ -1.4
LSM8-204ENST00000424702 COL6A6A6NMZ7 2263 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 TRAV6A0A075B6T7 132 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 A0A1W2PR80 420 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 DISC1C4P0D8 188 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 COX5AP20674 150 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 GLRXP35754 106 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 NAAAQ02083 359 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 FAM27E3Q08E93 113 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 CCDC92Q53HC0 331 aaPredicted RBP6.29□□□□□ -1.4
LSM8-204ENST00000424702 RTL6Q6ICC9 239 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 TMEM17Q86X19 198 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 Q8IYB0 196 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 BOLLQ8N9W6 283 aaKnown RBP6.29□□□□□ -1.4
LSM8-204ENST00000424702 OR52N4Q8NGI2 321 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 RAB1CQ92928 201 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 ADAT3Q96EY9 351 aaPredicted RBP6.29□□□□□ -1.4
LSM8-204ENST00000424702 MED28Q9H204 178 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 CXXC4Q9H2H0 198 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 ING3Q9NXR8 418 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 TAAR3PQ9P1P4 343 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 CD40P25942 277 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 GNG3P63215 75 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 SCGB2B2Q4G0G5 96 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 SFRP4Q6FHJ7 346 aaPredicted RBP6.29□□□□□ -1.4
LSM8-204ENST00000424702 NLRC3Q7RTR2 1065 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 ADAT1Q9BUB4 502 aaKnown RBP6.29□□□□□ -1.4
LSM8-204ENST00000424702 MMP28Q9H239 520 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 METTL17Q9H7H0 456 aaPredicted RBP6.29□□□□□ -1.4
LSM8-204ENST00000424702 GHRLQ9UBU3 117 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 CREBBPQ92793 2442 aa6.29□□□□□ -1.4
LSM8-204ENST00000424702 A0A0A6YYH2 397 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 NKX2-6A6NCS4 301 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 MEIS3P1A6NDR6 274 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 A6NJ64 397 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 XRCC3O43542 346 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 CPT2P23786 658 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 DGCR2P98153 550 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 RNASE10Q5GAN6 216 aaKnown RBP6.28□□□□□ -1.4
LSM8-204ENST00000424702 OR10K2Q6IF99 312 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 LRRTM1Q86UE6 522 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 GABRG1Q8N1C3 465 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 ZNF843Q8N446 348 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 TEX29Q8N6K0 151 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 BHLHE23Q8NDY6 225 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 RAB3CQ96E17 227 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 SELENOIQ9C0D9 397 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 OCEL1Q9H607 264 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 PHF3Q92576 2039 aaKnown RBP6.28□□□□□ -1.4
LSM8-204ENST00000424702 CCL2P13500 99 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 GABRR1P24046 479 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 TNFAIP6P98066 277 aaPredicted RBP6.28□□□□□ -1.4
LSM8-204ENST00000424702 FOXF2Q12947 444 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 CDNFQ49AH0 187 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 ATAD3CQ5T2N8 411 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 Q6ZTK2 550 aa6.28□□□□□ -1.4
LSM8-204ENST00000424702 OR10S1Q8NGN2 331 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms