RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 RPSAP08865 295 aaKnown RBP13.48□□□□□ -0.25
DDR1-234ENST00000424544 HTR1AP08908 422 aa13.48□□□□□ -0.25
DDR1-234ENST00000424544 PSMB10P40306 273 aa13.48□□□□□ -0.25
DDR1-234ENST00000424544 PRSS12P56730 875 aa13.48□□□□□ -0.25
DDR1-234ENST00000424544 ACTA2P62736 377 aa13.48□□□□□ -0.25
DDR1-234ENST00000424544 ACTG2P63267 376 aa13.48□□□□□ -0.25
DDR1-234ENST00000424544 IRF3Q14653 427 aa13.48□□□□□ -0.25
DDR1-234ENST00000424544 CDONQ4KMG0 1287 aa13.48□□□□□ -0.25
DDR1-234ENST00000424544 ZNF684Q5T5D7 378 aa13.48□□□□□ -0.25
DDR1-234ENST00000424544 ZNF773Q6PK81 442 aa13.48□□□□□ -0.25
DDR1-234ENST00000424544 LRRN1Q6UXK5 716 aa13.48□□□□□ -0.25
DDR1-234ENST00000424544 PGAP1Q75T13 922 aa13.48□□□□□ -0.25
DDR1-234ENST00000424544 C3orf56Q8N813 242 aa13.48□□□□□ -0.25
DDR1-234ENST00000424544 TSPAN14Q8NG11 270 aa13.48□□□□□ -0.25
DDR1-234ENST00000424544 NEIL1Q96FI4 390 aaPredicted RBP13.48□□□□□ -0.25
DDR1-234ENST00000424544 TTTY10Q9BZA0 68 aa13.48□□□□□ -0.25
DDR1-234ENST00000424544 PRDM13Q9H4Q3 707 aa13.48□□□□□ -0.25
DDR1-234ENST00000424544 MRM2Q9UI43 246 aaKnown RBP13.48□□□□□ -0.25
DDR1-234ENST00000424544 A0A087WXM4 84 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 IGHV2-70DA0A0C4DH43 119 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 IGHV3-64DA0A0J9YX35 117 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 CD300LBA8K4G0 201 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 PRR32B1ATL7 298 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 J3QLW9 94 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 M0R135 149 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 PSMD9O00233 223 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 ZNF19P17023 458 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 OPRL1P41146 370 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 TPTEP56180 551 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 OR12D2P58182 307 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 GRB2P62993 217 aaKnown RBP13.47□□□□□ -0.25
DDR1-234ENST00000424544 ZNF92Q03936 586 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 MPPED2Q15777 294 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 SNAI3Q3KNW1 292 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 TP53I3Q53FA7 332 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 ARMCX4Q5H9R4 360 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 DCDC5Q6ZRR9 648 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 C1orf87Q8N0U7 546 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 SPARTQ8N0X7 666 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 SYS1Q8N2H4 156 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 SVOPQ8N4V2 548 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 YIPF7Q8N8F6 280 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 PLPP7Q8NBV4 271 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 ZNF799Q96GE5 643 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 KCNJ15Q99712 375 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 MRI1Q9BV20 369 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 SLC22A4Q9H015 551 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 NIPAL2Q9H841 368 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 OR5V1Q9UGF6 321 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 CMYA5Q8N3K9 4069 aa13.47□□□□□ -0.25
DDR1-234ENST00000424544 MYL12BO14950 172 aa13.46□□□□□ -0.25
DDR1-234ENST00000424544 IGHV4-38-2P0DP08 117 aa13.46□□□□□ -0.25
DDR1-234ENST00000424544 RPS2P15880 293 aaKnown RBP13.46□□□□□ -0.25
DDR1-234ENST00000424544 DCTDP32321 178 aa13.46□□□□□ -0.25
DDR1-234ENST00000424544 RIDAP52758 137 aaKnown RBP13.46□□□□□ -0.25
DDR1-234ENST00000424544 EMX1Q04741 257 aaPredicted RBP13.46□□□□□ -0.25
DDR1-234ENST00000424544 MALLQ13021 153 aa13.46□□□□□ -0.25
DDR1-234ENST00000424544 OR2G6Q5TZ20 316 aa13.46□□□□□ -0.25
DDR1-234ENST00000424544 WDR25Q64LD2 544 aaPredicted RBP13.46□□□□□ -0.25
DDR1-234ENST00000424544 DRAM2Q6UX65 266 aa13.46□□□□□ -0.25
DDR1-234ENST00000424544 LYPD2Q6UXB3 125 aa13.46□□□□□ -0.25
DDR1-234ENST00000424544 OR52N1Q8NH53 320 aa13.46□□□□□ -0.25
DDR1-234ENST00000424544 SGMS2Q8NHU3 365 aa13.46□□□□□ -0.25
DDR1-234ENST00000424544 SPRYD4Q8WW59 207 aaPredicted RBP13.46□□□□□ -0.25
DDR1-234ENST00000424544 SPTSSAQ969W0 71 aa13.46□□□□□ -0.25
DDR1-234ENST00000424544 C4orf36Q96KX1 117 aa13.46□□□□□ -0.25
DDR1-234ENST00000424544 ZNF747Q9BV97 191 aa13.46□□□□□ -0.25
DDR1-234ENST00000424544 MND1Q9BWT6 205 aa13.46□□□□□ -0.25
DDR1-234ENST00000424544 ISG20L2Q9H9L3 353 aaKnown RBP13.46□□□□□ -0.25
DDR1-234ENST00000424544 BABAM2Q9NXR7 383 aa13.46□□□□□ -0.25
DDR1-234ENST00000424544 GNG8Q9UK08 70 aa13.46□□□□□ -0.25
DDR1-234ENST00000424544 LRP12Q9Y561 859 aa13.46□□□□□ -0.25
DDR1-234ENST00000424544 SOX21Q9Y651 276 aaPredicted RBP13.46□□□□□ -0.25
DDR1-234ENST00000424544 GMDSO60547 372 aa13.45□□□□□ -0.26
DDR1-234ENST00000424544 LHBP01229 141 aa13.45□□□□□ -0.26
DDR1-234ENST00000424544 APOC1P02654 83 aa13.45□□□□□ -0.26
DDR1-234ENST00000424544 CA6P23280 308 aa13.45□□□□□ -0.26
DDR1-234ENST00000424544 HSD11B1P28845 292 aa13.45□□□□□ -0.26
DDR1-234ENST00000424544 MAP2K4P45985 399 aa13.45□□□□□ -0.26
DDR1-234ENST00000424544 PRKXP51817 358 aa13.45□□□□□ -0.26
DDR1-234ENST00000424544 GBX2P52951 348 aaPredicted RBP13.45□□□□□ -0.26
DDR1-234ENST00000424544 GNB2P62879 340 aa13.45□□□□□ -0.26
DDR1-234ENST00000424544 RBMS3Q6XE24 437 aaKnown RBP13.45□□□□□ -0.26
DDR1-234ENST00000424544 FAM220AQ7Z4H9 259 aa13.45□□□□□ -0.26
DDR1-234ENST00000424544 GATAD2BQ8WXI9 593 aa13.45□□□□□ -0.26
DDR1-234ENST00000424544 SPSB4Q96A44 273 aa13.45□□□□□ -0.26
DDR1-234ENST00000424544 ZMAT3Q9HA38 289 aaKnown RBP13.45□□□□□ -0.26
DDR1-234ENST00000424544 ACOT13Q9NPJ3 140 aa13.45□□□□□ -0.26
DDR1-234ENST00000424544 MRPL15Q9P015 296 aaKnown RBP13.45□□□□□ -0.26
DDR1-234ENST00000424544 DNAJC9-AS1A6NH13 148 aa13.44□□□□□ -0.26
DDR1-234ENST00000424544 RPP14O95059 124 aaKnown RBP13.44□□□□□ -0.26
DDR1-234ENST00000424544 RNASE1P07998 156 aaKnown RBP13.44□□□□□ -0.26
DDR1-234ENST00000424544 PITPNBP48739 271 aa13.44□□□□□ -0.26
DDR1-234ENST00000424544 WNT4P56705 351 aa13.44□□□□□ -0.26
DDR1-234ENST00000424544 HOXA4Q00056 320 aaPredicted RBP13.44□□□□□ -0.26
DDR1-234ENST00000424544 FOXL1Q12952 345 aa13.44□□□□□ -0.26
DDR1-234ENST00000424544 MRPL28Q13084 256 aaKnown RBP13.44□□□□□ -0.26
DDR1-234ENST00000424544 SPHARQ15513 63 aa13.44□□□□□ -0.26
DDR1-234ENST00000424544 SLC9A3R2Q15599 337 aa13.44□□□□□ -0.26
DDR1-234ENST00000424544 GLYATL3Q5SZD4 288 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms