RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 TREM1Q9NP99 234 aa12.07□□□□□ -0.48
CTCFL-203ENST00000422109 ZNF107Q9UII5 783 aaPredicted RBP12.07□□□□□ -0.48
CTCFL-203ENST00000422109 MCTS1Q9ULC4 181 aaKnown RBP12.07□□□□□ -0.48
CTCFL-203ENST00000422109 A0A0G2JMM0 328 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 A0A1W2PPB8 328 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 A0A1W2PRS3 328 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 KIR3DP1A8MWS1 328 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 TRAPPC6AO75865 159 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 KLK3P07288 261 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-203ENST00000422109 GSTP1P09211 210 aaKnown RBP12.06□□□□□ -0.48
CTCFL-203ENST00000422109 MTCP1P56278 107 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 ENDOGQ14249 297 aaKnown RBP12.06□□□□□ -0.48
CTCFL-203ENST00000422109 GJC3Q8NFK1 279 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 FBXO17Q96EF6 278 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 FAAP24Q9BTP7 215 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 PECRQ9BY49 303 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 FAM96BQ9Y3D0 163 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 A0A0J9YW62 118 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 FBXO24O75426 580 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 SFT2D2O95562 160 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 PDGFBP01127 241 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-203ENST00000422109 B4GALT1P15291 398 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 RCC1P18754 421 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-203ENST00000422109 GRB2P62993 217 aaKnown RBP12.06□□□□□ -0.48
CTCFL-203ENST00000422109 ZNF345Q14585 488 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 GUCA2BQ16661 112 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 SLC25A53Q5H9E4 307 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 C9orf135Q5VTT2 229 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 ZNF774Q6NX45 483 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 TFAP2EQ6VUC0 442 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 PIK3IP1Q96FE7 263 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 ZNF2Q9BSG1 426 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-203ENST00000422109 DUSP23Q9BVJ7 150 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 SRXN1Q9BYN0 137 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 SLC6A15Q9H2J7 730 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 NELFAQ9H3P2 528 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 HDGFL3Q9Y3E1 203 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 DHRS7CA6NNS2 312 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 DHHO43323 396 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 LCATP04180 440 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 UMODP07911 640 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 RFC3P40938 356 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 RSPO1Q2MKA7 263 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-203ENST00000422109 AADACL3Q5VUY0 350 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 MARC2Q969Z3 335 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 PIGQQ9BRB3 760 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 HPF1Q9NWY4 346 aa12.06□□□□□ -0.48
CTCFL-203ENST00000422109 TEX13DA0A0J9YY54 714 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-203ENST00000422109 ZNF705EA8MWA4 302 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-203ENST00000422109 SCGNO76038 276 aa12.05□□□□□ -0.48
CTCFL-203ENST00000422109 OTX2P32243 289 aa12.05□□□□□ -0.48
CTCFL-203ENST00000422109 ID4P47928 161 aa12.05□□□□□ -0.48
CTCFL-203ENST00000422109 TSPO2Q5TGU0 170 aa12.05□□□□□ -0.48
CTCFL-203ENST00000422109 MRPL14Q6P1L8 145 aaKnown RBP12.05□□□□□ -0.48
CTCFL-203ENST00000422109 OR9K2Q8NGE7 335 aa12.05□□□□□ -0.48
CTCFL-203ENST00000422109 LDAHQ9H6V9 325 aa12.05□□□□□ -0.48
CTCFL-203ENST00000422109 LSM5Q9Y4Y9 91 aaKnown RBP12.05□□□□□ -0.48
CTCFL-203ENST00000422109 GPR179Q6PRD1 2367 aa12.05□□□□□ -0.48
CTCFL-203ENST00000422109 TOR1AO14656 332 aa12.05□□□□□ -0.48
CTCFL-203ENST00000422109 ABCD4O14678 606 aa12.05□□□□□ -0.48
CTCFL-203ENST00000422109 ACTL6AO96019 429 aa12.05□□□□□ -0.48
CTCFL-203ENST00000422109 TPT1P13693 172 aaKnown RBP12.05□□□□□ -0.48
CTCFL-203ENST00000422109 ACKR3P25106 362 aa12.05□□□□□ -0.48
CTCFL-203ENST00000422109 EIF1P41567 113 aaKnown RBP12.05□□□□□ -0.48
CTCFL-203ENST00000422109 TAS2R31P59538 309 aa12.05□□□□□ -0.48
CTCFL-203ENST00000422109 ECH1Q13011 328 aa12.05□□□□□ -0.48
CTCFL-203ENST00000422109 BAP18Q8IXM2 172 aa12.05□□□□□ -0.48
CTCFL-203ENST00000422109 FADS6Q8N9I5 356 aa12.05□□□□□ -0.48
CTCFL-203ENST00000422109 HLA-CQ95604 372 aa12.05□□□□□ -0.48
CTCFL-203ENST00000422109 NKX6-2Q9C056 277 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-203ENST00000422109 CRLF2Q9HC73 371 aa12.05□□□□□ -0.48
CTCFL-203ENST00000422109 PCP4L1A6NKN8 68 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 TOX3O15405 576 aaPredicted RBP12.04□□□□□ -0.48
CTCFL-203ENST00000422109 ZIC3O60481 467 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 DHRS3O75911 302 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 FARS2O95363 451 aaKnown RBP12.04□□□□□ -0.48
CTCFL-203ENST00000422109 CSTBP04080 98 aaKnown RBP12.04□□□□□ -0.48
CTCFL-203ENST00000422109 NME2P22392 152 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 CRIP3Q6Q6R5 217 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 OR14L1PQ8NHC6 308 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 SLC25A43Q8WUT9 341 aaPredicted RBP12.04□□□□□ -0.48
CTCFL-203ENST00000422109 NECAB3Q96P71 396 aaPredicted RBP12.04□□□□□ -0.48
CTCFL-203ENST00000422109 FAM117AQ9C073 453 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 PRDM6Q9NQX0 595 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 WNT16Q9UBV4 365 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 HS3ST3B1Q9Y662 390 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 TNRC18O15417 2968 aaPredicted RBP12.04□□□□□ -0.48
CTCFL-203ENST00000422109 F8W036 122 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 DNASE2O00115 360 aaPredicted RBP12.04□□□□□ -0.48
CTCFL-203ENST00000422109 CCNOP22674 350 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 NTF4P34130 210 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 SSR4P51571 173 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 BLOC1S1P78537 153 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 OR2A2Q6IF42 318 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 RPS19BP1Q86WX3 136 aaKnown RBP12.04□□□□□ -0.48
CTCFL-203ENST00000422109 CBLN2Q8IUK8 224 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 ARRDC1Q8N5I2 433 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 SEMA6DQ8NFY4 1073 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 ASB13Q8WXK3 278 aa12.04□□□□□ -0.48
CTCFL-203ENST00000422109 SGK3Q96BR1 496 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms