RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 OR1S2Q8NGQ3 325 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 MED30Q96HR3 178 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 TMEM246Q9BRR3 403 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 OR10A3P58181 314 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 C19orf57Q0VDD7 668 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 SSX9Q7RTT3 188 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 ADGRG3Q86Y34 549 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 ANGPTL4Q9BY76 406 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 CES1P1Q9UKY3 287 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 OR6C68A6NDL8 312 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 CDK2AP1O14519 115 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 YIF1AO95070 293 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 TBPP20226 339 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 RAB7AP51149 207 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 ZNF85Q03923 595 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 CMTM2Q8TAZ6 248 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 SMAP2Q8WU79 429 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-206ENST00000421141 ASPDHA6ND91 283 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 CRYM-AS1A6NIL9 109 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 ADAM20O43506 726 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 SPRY1O43609 319 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-206ENST00000421141 IGHA2P01877 340 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 BEST4Q8NFU0 473 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 LRRC29Q8WV35 223 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 RNF24Q9Y225 148 aa9.53□□□□□ -0.88
PTCH1-206ENST00000421141 K7EQM0 130 aa9.52□□□□□ -0.88
PTCH1-206ENST00000421141 TIPARPQ7Z3E1 657 aaKnown RBP9.52□□□□□ -0.88
PTCH1-206ENST00000421141 LGI3Q8N145 548 aa9.52□□□□□ -0.88
PTCH1-206ENST00000421141 OR2T35Q8NGX2 323 aa9.52□□□□□ -0.88
PTCH1-206ENST00000421141 PIMREGQ9BSJ6 248 aa9.52□□□□□ -0.88
PTCH1-206ENST00000421141 HES4Q9HCC6 221 aa9.52□□□□□ -0.88
PTCH1-206ENST00000421141 FGF20Q9NP95 211 aaPredicted RBP9.52□□□□□ -0.88
PTCH1-206ENST00000421141 SERPINE3A8MV23 424 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 TSPAN15O95858 294 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 TGM6O95932 706 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 F2RP25116 425 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 MOB1BQ7L9L4 216 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 SEH1LQ96EE3 360 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 ZNF416Q9BWM5 594 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 GPR35Q9HC97 309 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 NPTNQ9Y639 398 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 PRF1P14222 555 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 TAS2R30P59541 319 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 ISL1P61371 349 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 IGFBP7Q16270 282 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 C2orf76Q3KRA6 126 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 Q6ZRG5 221 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 UBAC2Q8NBM4 344 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 FYTTD1Q96QD9 318 aaKnown RBP9.52□□□□□ -0.89
PTCH1-206ENST00000421141 PLA2G12AQ9BZM1 189 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 PLAC1Q9HBJ0 212 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 ABCA4P78363 2273 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 ANGPTL7O43827 346 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 GPANK1O95872 356 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 STAC2Q6ZMT1 411 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 PHC2Q8IXK0 858 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 UCN2Q96RP3 112 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 TMEM38BQ9NVV0 291 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 TMA7Q9Y2S6 64 aaKnown RBP9.52□□□□□ -0.89
PTCH1-206ENST00000421141 PLXNA2O75051 1894 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 ARPC3O15145 178 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 TO15178 435 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 FUCA1P04066 466 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 CDONQ4KMG0 1287 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 FCRL1Q96LA6 429 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 OR2M2Q96R28 347 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 OR2B2Q9GZK3 357 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 MMP28Q9H239 520 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 PCYT1BQ9Y5K3 369 aaPredicted RBP9.52□□□□□ -0.89
PTCH1-206ENST00000421141 DUSP1P28562 367 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 KISS1Q15726 138 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 PNLIPRP3Q17RR3 467 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 OR4Q3Q8NH05 313 aa9.52□□□□□ -0.89
PTCH1-206ENST00000421141 ATP1A1-AS1Q5TC04 95 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 ADAM5Q6NVV9 412 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 C10orf35Q96D05 121 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 FLRT3Q9NZU0 649 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 LPAR3Q9UBY5 353 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 OMGP23515 440 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 ARL16Q0P5N6 197 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 GK2Q14410 553 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-206ENST00000421141 SPCS2Q15005 226 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 ST3GAL2Q16842 350 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 BEX5Q5H9J7 111 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 CREB3L2Q70SY1 520 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 PSD2Q9BQI7 771 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 MLXQ9UH92 298 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 KCNMB2Q9Y691 235 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 IFITM5A6NNB3 132 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 F6UZH7 168 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 CTLA4P16410 223 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 NKX6-1P78426 367 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-206ENST00000421141 HNF4GQ14541 408 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 CD276Q5ZPR3 534 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 TMEM179BQ7Z7N9 219 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 DVL3Q92997 716 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-206ENST00000421141 M0QYG6 137 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 FUT3P21217 361 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 PLA1AQ53H76 456 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 OR6S1Q8NH40 331 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms