RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 HAGHLQ6PII5 290 aaPredicted RBP10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 ATRAIDQ6UW56 229 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 C1QL2Q7Z5L3 287 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 SEMA6DQ8NFY4 1073 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 OR9K2Q8NGE7 335 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 FNDC9Q8TBE3 224 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 IFI44Q8TCB0 444 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 ROBO4Q8WZ75 1007 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 C1orf147Q96MC9 270 aaPredicted RBP10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 CNTNAP3BQ96NU0 1288 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 UCN2Q96RP3 112 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 CHST5Q9GZS9 411 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 METTL9Q9H1A3 318 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 SLC26A1Q9H2B4 701 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 KCNIP3Q9Y2W7 256 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 PCDHGA1Q9Y5H4 931 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 CACNA1EQ15878 2313 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 DBX1A6NMT0 343 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 H7C2Y5 167 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 ECI1P42126 302 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 IAH1Q2TAA2 248 aaPredicted RBP10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 HAS2Q92819 552 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 HLA-CQ95604 372 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 PIGQQ9BRB3 760 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 ZNF2Q9BSG1 426 aaPredicted RBP10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 WDR54Q9H977 334 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 GPR173Q9NS66 373 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 HPNP05981 417 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 CCL3P10147 92 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 NAAAQ02083 359 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 RAB32Q13637 225 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 HIST3H3Q16695 136 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 C6orf201Q7Z4U5 140 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 ZSCAN4Q8NAM6 433 aaPredicted RBP10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 TOMM40LQ969M1 308 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 HRH4Q9H3N8 390 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 SDK2Q58EX2 2172 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 SPEGQ15772 3267 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 TNFSF11O14788 317 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 SGCEO43556 437 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 ATG12O94817 140 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 SCGB1D2O95969 90 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 CYC1P08574 325 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 DBHP09172 617 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 UBE2V2Q15819 145 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 SWI5Q1ZZU3 235 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 PDSS1Q5T2R2 415 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 ZNF385CQ66K41 422 aaPredicted RBP10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 CLRN3Q8NCR9 226 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 CCDC54Q8NEL0 328 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 OR14L1PQ8NHC6 308 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 STOML3Q8TAV4 291 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 SAP25Q8TEE9 199 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 INTS12Q96CB8 462 aaKnown RBP10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 BORCS8Q96FH0 119 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 TMEM218A2RU14 115 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 PCOLCEQ15113 449 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 PPA1Q15181 289 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 CNN3Q15417 329 aaKnown RBP10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 SURF2Q15527 256 aaPredicted RBP10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 ANKRD55Q3KP44 614 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 MRPL14Q6P1L8 145 aaKnown RBP10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 GPR137CQ8N3F9 429 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 TMEM230Q96A57 120 aa10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 ZNF629Q9UEG4 869 aaPredicted RBP10.27□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 CPAMD8Q8IZJ3 1885 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 TRAPPC6AO75865 159 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 P04436 131 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 LIFP15018 202 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 CTSSP25774 331 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 FAM89BQ8N5H3 189 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 SLC30A7Q8NEW0 376 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 OR5T2Q8NGG2 359 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 RNF126Q9BV68 326 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 OR5AC2Q9NZP5 309 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 MLXQ9UH92 298 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 COL5A1P20908 1838 aaPredicted RBP10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 NUDT19A8MXV4 375 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 K7EPK0 472 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 CBR3O75828 277 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 CTRB1P17538 263 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 SCRN3Q0VDG4 424 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 TAF9Q16594 264 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 C10orf128Q5T292 105 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 CTRB2Q6GPI1 263 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 PLXDC2Q6UX71 529 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 FAM71E2Q8N5Q1 922 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 C10orf35Q96D05 121 aa10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 CMSS1Q9BQ75 279 aaKnown RBP10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 RTBDNQ9BSG5 229 aaPredicted RBP10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 BARX1Q9HBU1 254 aaPredicted RBP10.26□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 MPTX1A8MV57 137 aa10.25□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 ANGPTL7O43827 346 aa10.25□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 FOLR3P41439 243 aa10.25□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 RAC1P63000 192 aa10.25□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 EIF3IQ13347 325 aaKnown RBP10.25□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 ZNF239Q16600 458 aaKnown RBP10.25□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 FAM219AQ8IW50 185 aa10.25□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 SPSB1Q96BD6 273 aa10.25□□□□□ -0.77
CSPG4P3Y-201ENST00000418188 OR10C1Q96KK4 312 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms