RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 TIMD4Q96H15 378 aa14.98□□□□□ -0.01
VCP-202ENST00000417448 C4orf36Q96KX1 117 aa14.98□□□□□ -0.01
VCP-202ENST00000417448 DIRC2Q96SL1 478 aa14.98□□□□□ -0.01
VCP-202ENST00000417448 ZNF649Q9BS31 505 aa14.98□□□□□ -0.01
VCP-202ENST00000417448 ADAT1Q9BUB4 502 aaKnown RBP14.98□□□□□ -0.01
VCP-202ENST00000417448 ALG8Q9BVK2 526 aa14.98□□□□□ -0.01
VCP-202ENST00000417448 ERVK13-1Q9NX77 482 aa14.98□□□□□ -0.01
VCP-202ENST00000417448 UBAP1Q9NZ09 502 aa14.98□□□□□ -0.01
VCP-202ENST00000417448 NUFIP1Q9UHK0 495 aaKnown RBP14.98□□□□□ -0.01
VCP-202ENST00000417448 AUP1Q9Y679 476 aa14.98□□□□□ -0.01
VCP-202ENST00000417448 A0A1B0GTI1 187 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 MDFIC2A0A1B0GVS7 189 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 ZNF850A8MQ14 1090 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 E9PI62 339 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 C3orf80F5H4A9 247 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 FADS2O95864 444 aaKnown RBP14.97□□□□□ -0.01
VCP-202ENST00000417448 IGHA1P01876 353 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 DCTDP32321 178 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 MMP16P51512 607 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 NANOS3P60323 173 aaKnown RBP14.97□□□□□ -0.01
VCP-202ENST00000417448 ACTC1P68032 377 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 ACTA1P68133 377 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 RELBQ01201 579 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 RAB40BQ12829 278 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 IL18R1Q13478 541 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 MPPED2Q15777 294 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 HFEQ30201 348 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 KLHL22Q53GT1 634 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 WDR38Q5JTN6 314 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 ASPHD2Q6ICH7 369 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 THAP5Q7Z6K1 395 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 ELMOD2Q8IZ81 293 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 BPIFB6Q8NFQ5 453 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 PIGCQ92535 297 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 GCM1Q9NP62 436 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 MRPS18AQ9NVS2 196 aaKnown RBP14.97□□□□□ -0.01
VCP-202ENST00000417448 IL19Q9UHD0 177 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 CLEC2DQ9UHP7 191 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 PCDHGB5Q9Y5G0 923 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 SNX5Q9Y5X3 404 aa14.97□□□□□ -0.01
VCP-202ENST00000417448 IGHV3OR16-10A0A075B7F0 116 aa14.96□□□□□ -0.01
VCP-202ENST00000417448 ISPDA4D126 451 aa14.96□□□□□ -0.01
VCP-202ENST00000417448 ACOD1A6NK06 481 aa14.96□□□□□ -0.01
VCP-202ENST00000417448 ANKRD30BLA7E2S9 258 aa14.96□□□□□ -0.01
VCP-202ENST00000417448 FOXH1O75593 365 aa14.96□□□□□ -0.01
VCP-202ENST00000417448 SULT1C4O75897 302 aa14.96□□□□□ -0.01
VCP-202ENST00000417448 CYB5R3P00387 301 aaPredicted RBP14.96□□□□□ -0.01
VCP-202ENST00000417448 GRPP07492 148 aa14.96□□□□□ -0.01
VCP-202ENST00000417448 LIMS3P0CW19 117 aa14.96□□□□□ -0.01
VCP-202ENST00000417448 LIMS4P0CW20 117 aa14.96□□□□□ -0.01
VCP-202ENST00000417448 IGHV4-38-2P0DP08 117 aa14.96□□□□□ -0.01
VCP-202ENST00000417448 GALEQ14376 348 aa14.96□□□□□ -0.01
VCP-202ENST00000417448 OR8B8Q15620 311 aa14.96□□□□□ -0.01
VCP-202ENST00000417448 FAM201AQ5SY85 155 aa14.96□□□□□ -0.01
VCP-202ENST00000417448 FAM220AQ7Z4H9 259 aa14.96□□□□□ -0.01
VCP-202ENST00000417448 C19orf18Q8NEA5 215 aa14.96□□□□□ -0.01
VCP-202ENST00000417448 PELI1Q96FA3 418 aa14.96□□□□□ -0.01
VCP-202ENST00000417448 PAPOLGQ9BWT3 736 aaKnown RBP14.96□□□□□ -0.01
VCP-202ENST00000417448 FGF23Q9GZV9 251 aaPredicted RBP14.96□□□□□ -0.01
VCP-202ENST00000417448 FGF20Q9NP95 211 aaPredicted RBP14.96□□□□□ -0.01
VCP-202ENST00000417448 PPP1R3CQ9UQK1 317 aa14.96□□□□□ -0.01
VCP-202ENST00000417448 DOCK11Q5JSL3 2073 aa14.96□□□□□ -0.02
VCP-202ENST00000417448 A0A0U1RQV5 110 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 A0A1B0GUS0 222 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 A0A1B0GWJ7 208 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 FAM181BA6NEQ2 426 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 TSPAN15O95858 294 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 IGLV3-1P01715 115 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 FAHP16930 419 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 ZNF12P17014 697 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 RAG2P55895 527 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 SEC61A1P61619 476 aaKnown RBP14.95□□□□□ -0.02
VCP-202ENST00000417448 PRDX4Q13162 271 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 OR2G6Q5TZ20 316 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 ZNF826PQ6ZT77 177 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 FBLIM1Q8WUP2 373 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 SGCDQ92629 289 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 MS4A7Q9GZW8 240 aaPredicted RBP14.95□□□□□ -0.02
VCP-202ENST00000417448 RGCCQ9H4X1 137 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 OPA3Q9H6K4 179 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 MRPL15Q9P015 296 aaKnown RBP14.95□□□□□ -0.02
VCP-202ENST00000417448 PIGLQ9Y2B2 252 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 INSIG2Q9Y5U4 225 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 HSPE1-MOB4S4R3N1 261 aa14.95□□□□□ -0.02
VCP-202ENST00000417448 H0YJX3 145 aa14.94□□□□□ -0.02
VCP-202ENST00000417448 TIMM23O14925 209 aa14.94□□□□□ -0.02
VCP-202ENST00000417448 HOXA3O43365 443 aaPredicted RBP14.94□□□□□ -0.02
VCP-202ENST00000417448 TNFRSF1AP19438 455 aa14.94□□□□□ -0.02
VCP-202ENST00000417448 CFL1P23528 166 aaKnown RBP14.94□□□□□ -0.02
VCP-202ENST00000417448 DDOSTP39656 456 aa14.94□□□□□ -0.02
VCP-202ENST00000417448 SRP9P49458 86 aaKnown RBP14.94□□□□□ -0.02
VCP-202ENST00000417448 GTF2A1P52655 376 aaPredicted RBP14.94□□□□□ -0.02
VCP-202ENST00000417448 CEP78Q5JTW2 689 aa14.94□□□□□ -0.02
VCP-202ENST00000417448 OLFML2AQ68BL7 652 aa14.94□□□□□ -0.02
VCP-202ENST00000417448 C9orf139Q6ZV77 190 aa14.94□□□□□ -0.02
VCP-202ENST00000417448 WDR86Q86TI4 376 aa14.94□□□□□ -0.02
VCP-202ENST00000417448 BOLLQ8N9W6 283 aaKnown RBP14.94□□□□□ -0.02
VCP-202ENST00000417448 OR2G2Q8NGZ5 317 aa14.94□□□□□ -0.02
VCP-202ENST00000417448 BEX1Q9HBH7 125 aa14.94□□□□□ -0.02
VCP-202ENST00000417448 TMEM106BQ9NUM4 274 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms