RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 LRRN1Q6UXK5 716 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 UNQ6126/PRO20091Q6UXV3 157 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 ZNF841Q6ZN19 808 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 PLEKHG7Q6ZR37 379 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 LHFPL3Q86UP9 236 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-202ENST00000416769 ZNF679Q8IYX0 411 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 MUC20Q8N307 709 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-202ENST00000416769 OR1F12Q8NHA8 337 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 ZDHHC16Q969W1 377 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 NEIL1Q96FI4 390 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-202ENST00000416769 OR8B4Q96RC9 309 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 TBX15Q96SF7 602 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 AMELYQ99218 206 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 TBX5Q99593 518 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 ATF6BQ99941 703 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 PCGF1Q9BSM1 259 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 MROQ9BYG7 248 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 CENPMQ9NSP4 180 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 PAK1IP1Q9NWT1 392 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-202ENST00000416769 CHCHD3Q9NX63 227 aaKnown RBP10.71□□□□□ -0.69
LINC00339-202ENST00000416769 ERVK13-1Q9NX77 482 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 KIR2DS1A0A191URI9 304 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 ZNF878C9JN71 531 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 RGS10O43665 173 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 SULT1C4O75897 302 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 H2BFMP0C1H6 154 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 LIMS3P0CW19 117 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 LIMS4P0CW20 117 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 MYL12AP19105 171 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 C21orf33P30042 268 aaPredicted RBP10.7□□□□□ -0.7
LINC00339-202ENST00000416769 DCTDP32321 178 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 OPRL1P41146 370 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 GRB2P62993 217 aaKnown RBP10.7□□□□□ -0.7
LINC00339-202ENST00000416769 TAF13Q15543 124 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 RSPO1Q2MKA7 263 aaPredicted RBP10.7□□□□□ -0.7
LINC00339-202ENST00000416769 KCTD21Q4G0X4 260 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 ZNF684Q5T5D7 378 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 WDR25Q64LD2 544 aaPredicted RBP10.7□□□□□ -0.7
LINC00339-202ENST00000416769 Q6YL49 198 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 C17orf107Q6ZR85 190 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 SSX6Q7RTT6 188 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 PRSS48Q7RTY5 328 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 KRT77Q7Z794 578 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 PDZD9Q8IXQ8 264 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 FGFRL1Q8N441 504 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 OR8G5Q8NG78 346 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 KCNJ15Q99712 375 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 CDCA4Q9BXL8 241 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 PRDM13Q9H4Q3 707 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 NIPAL2Q9H841 368 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 ERVK-18Q9QC07 812 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 KLHDC2Q9Y2U9 406 aa10.7□□□□□ -0.7
LINC00339-202ENST00000416769 CAB39Q9Y376 341 aaPredicted RBP10.7□□□□□ -0.7
LINC00339-202ENST00000416769 C5orf63A6NC05 138 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 METTL15A6NJ78 407 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 TNFAIP8O95379 198 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 IGHV4-59P01825 116 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 APOC1P02654 83 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 KRT8P05787 483 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 PPIAL4GP0DN37 164 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 RAC2P15153 192 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 EEF1B2P24534 225 aaKnown RBP10.69□□□□□ -0.7
LINC00339-202ENST00000416769 CFHR2P36980 270 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 ETV1P50549 477 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 TPTEP56180 551 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 MAB21L1Q13394 359 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 MPPED2Q15777 294 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 KRTAP27-1Q3LI81 207 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 CDONQ4KMG0 1287 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 ARL9Q6T311 187 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 C1orf174Q8IYL3 243 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 SYS1Q8N2H4 156 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 NANOGP1Q8N7R0 232 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 OR8B3Q8NGG8 313 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 SPTSSAQ969W0 71 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 OR8B2Q96RD0 313 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 ALG8Q9BVK2 526 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 BEX1Q9HBH7 125 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 SMURF1Q9HCE7 757 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 UFSP2Q9NUQ7 469 aa10.69□□□□□ -0.7
LINC00339-202ENST00000416769 CLPSL1A2RUU4 121 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 PRR32B1ATL7 298 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 MMP9P14780 707 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 OTX1P32242 354 aaPredicted RBP10.68□□□□□ -0.7
LINC00339-202ENST00000416769 RIDAP52758 137 aaKnown RBP10.68□□□□□ -0.7
LINC00339-202ENST00000416769 DLX1P56177 255 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 ACTA2P62736 377 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 ACTG2P63267 376 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 IRF3Q14653 427 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 SFRP4Q6FHJ7 346 aaPredicted RBP10.68□□□□□ -0.7
LINC00339-202ENST00000416769 FBXW12Q6X9E4 464 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 TMPRSS11AQ6ZMR5 421 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 NAA40Q86UY6 237 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 YIPF7Q8N8F6 280 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 BOLLQ8N9W6 283 aaKnown RBP10.68□□□□□ -0.7
LINC00339-202ENST00000416769 OR4F5Q8NH21 305 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 OR52N1Q8NH53 320 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 LINC01006Q8NI28 216 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 SGCDQ92629 289 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms