RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 METTL21AQ8WXB1 218 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 PRODH2Q9UF12 536 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 BORCS7-ASMTA0A0B4J1R7 106 aa13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 ZNF25P17030 456 aaPredicted RBP13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 MPZP25189 248 aa13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 AFF3P51826 1226 aaKnown RBP13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 RPS15AP62244 130 aaKnown RBP13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 LBHQ53QV2 105 aaPredicted RBP13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 FBXO42Q6P3S6 717 aa13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 YPEL4Q96NS1 127 aa13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 EHFQ9NZC4 300 aa13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 SERINC4A6NH21 518 aa13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 SOCS1O15524 211 aa13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 GAPDHP04406 335 aaKnown RBP13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 NHLH2Q02577 135 aa13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 CBLN3Q6UW01 205 aa13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 ZNF664Q8N3J9 261 aa13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 TMEM156Q8N614 296 aa13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 LRRC75AQ8NAA5 344 aa13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 DTWD2Q8NBA8 298 aa13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 APOOQ9BUR5 198 aa13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 SIRT7Q9NRC8 400 aa13.03□□□□□ -0.32
NCKIPSD-204ENST00000416649 A8MWP6 167 aa13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 CDRT15L2A8MXV6 281 aa13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 ZNF264O43296 627 aa13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 CCL20P78556 96 aa13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 TNFRSF9Q07011 255 aa13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 MGAT2Q10469 447 aa13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 C1QL3Q5VWW1 255 aa13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 RNF144BQ7Z419 303 aa13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 P4HA3Q7Z4N8 544 aa13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 CATSPERDQ86XM0 798 aa13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 C17orf78Q8N4C9 275 aa13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 SMRP1Q8NCR6 262 aa13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 ABHD5Q8WTS1 349 aa13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 HIST1H2BLQ99880 126 aa13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 TBC1D29Q9UFV1 150 aa13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 OR14J1Q9UGF5 321 aa13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 MUC22E2RYF6 1773 aaPredicted RBP13.02□□□□□ -0.32
NCKIPSD-204ENST00000416649 ELOA3CA0A087WX78 387 aaPredicted RBP13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 TMEM269A0A1B0GVZ9 245 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 A0A1W2PP11 408 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 JMJD7P0C870 316 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 PGA4P0DJD7 388 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 PGA5P0DJD9 388 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 CSNK2A1P68400 391 aaPredicted RBP13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 CSNK2A3Q8NEV1 391 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 OR13G1Q8NGZ3 307 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 DDA1Q9BW61 102 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 TPSD1Q9BZJ3 242 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 WFDC1Q9HC57 220 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 MRPL22Q9NWU5 206 aaKnown RBP13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 SLC5A6Q9Y289 635 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 MTCH2Q9Y6C9 303 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 MASP2O00187 686 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 FGF7P21781 194 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 C1orf100Q5SVJ3 147 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 PEG10Q86TG7 708 aaKnown RBP13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 OR1E3Q8WZA6 343 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 OR52A1Q9UKL2 312 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 CYP8B1Q9UNU6 501 aa13.02□□□□□ -0.33
NCKIPSD-204ENST00000416649 DEDDO75618 318 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 ZNF10P21506 573 aaPredicted RBP13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 FPR2P25090 351 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 MAS1LP35410 378 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 NUBP1P53384 320 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 ZNF429Q86V71 674 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 MRPL24Q96A35 216 aaKnown RBP13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 KLHDC3Q9BQ90 382 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 NDUFAF3Q9BU61 184 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 ZNF724A8MTY0 619 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 PLRG1O43660 514 aaKnown RBP13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 IFNA21P01568 189 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 CTLA4P16410 223 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 FSTP19883 344 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 TBPP20226 339 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 EGR4Q05215 589 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 CDCP2Q5VXM1 449 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 FDX2Q6P4F2 183 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 COMMD2Q86X83 199 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 ZFP62Q8NB50 900 aaPredicted RBP13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 SCGB3A2Q96PL1 93 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 ABHD14AQ9BUJ0 271 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 SLC25A31Q9H0C2 315 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 Q9N2J8 555 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 C14orf166Q9Y224 244 aaKnown RBP13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 TMED3Q9Y3Q3 217 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 LIPGQ9Y5X9 500 aa13.01□□□□□ -0.33
NCKIPSD-204ENST00000416649 SEC11BP0C7V7 166 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 SLC2A1P11166 492 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 IL15RAQ13261 267 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 C1orf61Q13536 156 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 Q7L0L9 218 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 HIST2H2ABQ8IUE6 130 aaPredicted RBP13□□□□□ -0.33
NCKIPSD-204ENST00000416649 M1APQ8TC57 530 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 RSC1A1Q92681 617 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 TAAR8Q969N4 342 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 DUSP15Q9H1R2 295 aaPredicted RBP13□□□□□ -0.33
NCKIPSD-204ENST00000416649 C1orf123Q9NWV4 160 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms