RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 SPAG4Q9NPE6 437 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 CENPMQ9NSP4 180 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 RHBDD3Q9Y3P4 386 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 STAB2Q8WWQ8 2551 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 HTR3EA5X5Y0 456 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 OR6C68A6NDL8 312 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 A6NDX4 124 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 SH2D7A6NKC9 451 aaPredicted RBP7.53□□□□□ -1.2
LINC01238-201ENST00000416204 CASQ2O14958 399 aaPredicted RBP7.53□□□□□ -1.2
LINC01238-201ENST00000416204 SYNGR1O43759 233 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 BAG2O95816 211 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 TXNDC12O95881 172 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 RENP00797 406 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 CCL3L1P16619 93 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 NAA10P41227 235 aaPredicted RBP7.53□□□□□ -1.2
LINC01238-201ENST00000416204 RPS6KA3P51812 740 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 LGALS4P56470 323 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 MZT1Q08AG7 82 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 FLOT2Q14254 428 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 TRIM25Q14258 630 aaKnown RBP7.53□□□□□ -1.2
LINC01238-201ENST00000416204 SEC23BQ15437 767 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 TAF13Q15543 124 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 SLC36A3Q495N2 470 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 LDLRAD2Q5SZI1 272 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 SLC35F1Q5T1Q4 408 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 SMARCD3Q6STE5 483 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 DPY19L2P2Q6ZN68 376 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 ZNF788Q6ZQV5 615 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 KCTD8Q6ZWB6 473 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 SLC16A9Q7RTY1 509 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 ARPINQ7Z6K5 226 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 RNF113BQ8IZP6 322 aaKnown RBP7.53□□□□□ -1.2
LINC01238-201ENST00000416204 OR4M1Q8NGD0 313 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 OR5D13Q8NGL4 314 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 OR52J3Q8NH60 311 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 ANGPTL6Q8NI99 470 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 NRG4Q8WWG1 115 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 MYDGFQ969H8 173 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 RCC1LQ96I51 464 aaKnown RBP7.53□□□□□ -1.2
LINC01238-201ENST00000416204 HSH2DQ96JZ2 352 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 LYZL4Q96KX0 146 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 GPX7Q96SL4 187 aaPredicted RBP7.53□□□□□ -1.2
LINC01238-201ENST00000416204 ZNF184Q99676 751 aaPredicted RBP7.53□□□□□ -1.2
LINC01238-201ENST00000416204 PAPOLGQ9BWT3 736 aaKnown RBP7.53□□□□□ -1.2
LINC01238-201ENST00000416204 PRSS22Q9GZN4 317 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 FGF23Q9GZV9 251 aaPredicted RBP7.53□□□□□ -1.2
LINC01238-201ENST00000416204 YY1AP1Q9H869 796 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 DNAJC27Q9NZQ0 273 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 CD300AQ9UGN4 299 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 TCF19Q9Y242 345 aa7.53□□□□□ -1.2
LINC01238-201ENST00000416204 IGKV1D-17A0A075B6S4 117 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 TRBV4-1A0A0J9YWV2 114 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 OR2AT4A6NND4 320 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 FAM220BPB1ANY3 271 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 SIGLEC5O15389 551 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 RHBDL1O75783 438 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 DIRAS1O95057 198 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 ANXA2P07355 339 aaKnown RBP7.52□□□□□ -1.21
LINC01238-201ENST00000416204 ACAA1P09110 424 aaPredicted RBP7.52□□□□□ -1.21
LINC01238-201ENST00000416204 PIPP12273 146 aaPredicted RBP7.52□□□□□ -1.21
LINC01238-201ENST00000416204 HSD17B1P14061 328 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 ZNF823P16415 610 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 FAHP16930 419 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 GNALP38405 381 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 OMPP47874 163 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 SLC7A2P52569 658 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 FAM3AP98173 230 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 CD83Q01151 205 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 EGFEM1PQ0D2K5 195 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 SSX2Q16385 188 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 TIGD6Q17RP2 521 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 NKAPLQ5M9Q1 402 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 ATPAF1Q5TC12 328 aaPredicted RBP7.52□□□□□ -1.21
LINC01238-201ENST00000416204 ERICH5Q6P6B1 374 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 LIAT1Q6ZQX7 453 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 FKBP9P1Q75LS8 142 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 DCXRQ7Z4W1 244 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 BATF2Q8N1L9 274 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 CYB561A3Q8NBI2 242 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 OR2T12Q8NG77 320 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 OR8J3Q8NGG0 315 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 FANK1Q8TC84 345 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 TFAP2CQ92754 450 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 C12orf43Q96C57 262 aaKnown RBP7.52□□□□□ -1.21
LINC01238-201ENST00000416204 CCDC124Q96CT7 223 aaKnown RBP7.52□□□□□ -1.21
LINC01238-201ENST00000416204 MED30Q96HR3 178 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 REEP6Q96HR9 211 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 DMRTB1Q96MA1 342 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 NR1H4Q96RI1 486 aaPredicted RBP7.52□□□□□ -1.21
LINC01238-201ENST00000416204 IFT27Q9BW83 186 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 SP140LQ9H930 580 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 BRD7Q9NPI1 651 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 ABCB10Q9NRK6 738 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 NLKQ9UBE8 527 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 ABCD2Q9UBJ2 740 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 TMEM5Q9Y2B1 443 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 AP3M1Q9Y2T2 418 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 CSMD3Q7Z407 3707 aa7.52□□□□□ -1.21
LINC01238-201ENST00000416204 AQP12BA6NM10 295 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 ZNF850A8MQ14 1090 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms