RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 SPINT2O43291 252 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 THBS3P49746 956 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 RAB32Q13637 225 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 LAMTOR1Q6IAA8 161 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 STPG2Q8N412 459 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 DOCK6Q96HP0 2047 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 TMEM272A0A1B0GTI8 110 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 ZNF320A2RRD8 509 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 PPICP45877 212 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 C21orf58P58505 322 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 RPS4XP62701 263 aaKnown RBP11.56□□□□□ -0.56
SCN1B-202ENST00000415950 VAMP3Q15836 100 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 SLC43A2Q8N370 569 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 EXD3Q8N9H8 876 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 TMEM104Q8NE00 496 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 GPR137Q96N19 417 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 SHARPINQ9H0F6 387 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 IFT22Q9H7X7 185 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 MMP25Q9NPA2 562 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 SSUH2Q9Y2M2 353 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 SERTM1A2A2V5 107 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 LRP5LA4QPB2 252 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 YIF1AO95070 293 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 EN2P19622 333 aaPredicted RBP11.56□□□□□ -0.56
SCN1B-202ENST00000415950 TMEM196Q5HYL7 178 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 C17orf78Q8N4C9 275 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 OR1J1Q8NGS3 322 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 BTF3L4Q96K17 158 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 OR2A5Q96R48 311 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 DNAJB12Q9NXW2 375 aaKnown RBP11.56□□□□□ -0.56
SCN1B-202ENST00000415950 ST3GAL6Q9Y274 331 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 WNK2Q9Y3S1 2297 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 KIF26BQ2KJY2 2108 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 G3V3Q6 166 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 SPRY1O43609 319 aaPredicted RBP11.55□□□□□ -0.56
SCN1B-202ENST00000415950 OR7C2O60412 319 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 NRASP01111 189 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 SFTA3P0C7M3 94 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 SLC25A4P12235 298 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 CTLA4P16410 223 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 ECI1P42126 302 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 RAG2P55895 527 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 FOXL2P58012 376 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 ANKRD16Q6P6B7 361 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 OR5B3Q8NH48 314 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 OTOSQ8NHW6 89 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 ZNF891A8MT65 544 aaPredicted RBP11.55□□□□□ -0.56
SCN1B-202ENST00000415950 SLC31A2O15432 143 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 WNT11O96014 354 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 HLA-DQB1P01920 261 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 KRTDAPP60985 99 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 MIDNQ504T8 468 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 PRR27Q6MZM9 219 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 PLXDC2Q6UX71 529 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 TOX2Q96NM4 488 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 LRRC3BQ96PB8 259 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 OR8B4Q96RC9 309 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 TOLLIPQ9H0E2 274 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 PLEKHA2Q9HB19 425 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 NDRG3Q9UGV2 375 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 UTRNP46939 3433 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 CXCL13O43927 109 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 VSIG10L2P0DP72 767 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 NDUFB7P17568 137 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 DRD3P35462 400 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 APOBEC1P41238 236 aaKnown RBP11.55□□□□□ -0.56
SCN1B-202ENST00000415950 FUT5Q11128 374 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 TOMM34Q15785 309 aaPredicted RBP11.55□□□□□ -0.56
SCN1B-202ENST00000415950 GUCA2BQ16661 112 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 NCMAPQ5T1S8 102 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 RPL7L1Q6DKI1 246 aaKnown RBP11.55□□□□□ -0.56
SCN1B-202ENST00000415950 TMEM52Q8NDY8 209 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 CDCA3Q99618 268 aaPredicted RBP11.55□□□□□ -0.56
SCN1B-202ENST00000415950 TXNIPQ9H3M7 391 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 R4GMQ9 66 aa11.55□□□□□ -0.56
SCN1B-202ENST00000415950 ZNF98A6NK75 572 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 TGOLN2O43493 480 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 RAB13P51153 203 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 ZNF121P58317 390 aaPredicted RBP11.54□□□□□ -0.56
SCN1B-202ENST00000415950 ZXDAP98168 799 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 C9orf152Q5JTZ5 239 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 ANKRD31Q8N7Z5 1873 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 UBAC2Q8NBM4 344 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 OR52N4Q8NGI2 321 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 TEX101Q9BY14 249 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 ESRP2Q9H6T0 727 aaKnown RBP11.54□□□□□ -0.56
SCN1B-202ENST00000415950 AMDHD2Q9Y303 409 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 CENPFP49454 3210 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 OTOFQ9HC10 1997 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 LY86O95711 162 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 CLEC3BP05452 202 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 ICAM2P13598 275 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 LIMS1P48059 325 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 OR10P1Q8NGE3 313 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 RGP1Q92546 391 aaPredicted RBP11.54□□□□□ -0.56
SCN1B-202ENST00000415950 APH1AQ96BI3 265 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 NPAS1Q99742 590 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 NUDT9Q9BW91 350 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 COL24A1Q17RW2 1714 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 A0A1W2PPV9 198 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms