RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 CNMDO75829 334 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 AQP8O94778 261 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 UBL3O95164 117 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 ACTL6AO96019 429 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 PDYNP01213 254 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 APOC1P02654 83 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 GAPDHP04406 335 aaKnown RBP3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 TCRBP04435 133 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 IL5P05113 134 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 GIPP09681 153 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 PPIAL4FP0DN26 164 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 SAGP10523 405 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 NSG1P42857 185 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 XKP51811 444 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 CEBPGP53567 150 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 CRYBA2P53672 197 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 SPCS3P61009 180 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 MAXP61244 160 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 AP1S1P61966 158 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 HERV-K104P63124 156 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 CDK6Q00534 326 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 CDK5Q00535 292 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 HMGCS1Q01581 520 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 PUDPQ08623 228 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 EXOSC2Q13868 293 aaKnown RBP3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 IHHQ14623 411 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 MPPED2Q15777 294 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 VAMP3Q15836 100 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 SYPL1Q16563 259 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 ACKR1Q16570 336 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 HLA-BQ31612 363 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 FAM182AQ5T1J6 154 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 HENMT1Q5T8I9 393 aaKnown RBP3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 TMEM225Q6GV28 225 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 REEP3Q6NUK4 255 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 CD164L2Q6UWJ8 174 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 C3P1Q6ZMU1 363 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 ANKRD33Q7Z3H0 272 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 TMPRSS11BQ86T26 416 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 OAFQ86UD1 273 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 HOGA1Q86XE5 327 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 FBXO16Q8IX29 292 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 PIANPQ8IYJ0 282 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 PRSS58Q8IYP2 241 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 TDHQ8IZJ6 230 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR6V1Q8N148 313 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 GPC2Q8N158 579 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 KRTCAP2Q8N6L1 136 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 ARIH2OSQ8N7S6 290 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 LRRC75AQ8NAA5 344 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 AQP11Q8NBQ7 271 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 ATP6V1C2Q8NEY4 427 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 STXBP6Q8NFX7 210 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR51G2Q8NGK0 314 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR2T4Q8NH00 348 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR52N5Q8NH56 324 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 RPLP0P6Q8NHW5 317 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 NUBPLQ8TB37 319 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 SLC7A13Q8TCU3 470 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 HAVCR2Q8TDQ0 301 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 C2orf15Q8WU43 125 aaKnown RBP3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 APOBEC4Q8WW27 367 aaKnown RBP3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 SMPDL3AQ92484 453 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 FAM3CQ92520 227 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 GTF3AQ92664 365 aaKnown RBP3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 FGF11Q92914 225 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 UBE2E3Q969T4 207 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 WDR34Q96EX3 536 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 PHYHIPLQ96FC7 376 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 TGM7Q96PF1 710 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 SLC38A2Q96QD8 506 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 HBEGFQ99075 208 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 ATF6BQ99941 703 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 NIPSNAP1Q9BPW8 284 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 SEC22CQ9BRL7 303 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 PAPOLGQ9BWT3 736 aaKnown RBP3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 TSSK6Q9BXA6 273 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 SLC19A3Q9BZV2 496 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 POLR2J3Q9H1A7 115 aaKnown RBP3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 ABCG5Q9H222 651 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 REEP4Q9H6H4 257 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 RNF167Q9H6Y7 350 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 WDR54Q9H977 334 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 NMNAT1Q9HAN9 279 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 PLEKHA1Q9HB21 404 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 Q9N2K0 584 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 PHPT1Q9NRX4 125 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 ABRACLQ9P1F3 81 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 C19orf25Q9UFG5 118 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 FLVCR2Q9UPI3 526 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 BAIAP2Q9UQB8 552 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 PPIAL4AQ9Y536 164 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 SNX10Q9Y5X0 201 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 BRCA1P38398 1863 aaKnown RBP3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 NYNRINQ9P2P1 1898 aaKnown RBP3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 MYLKQ15746 1914 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 CHD5Q8TDI0 1954 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 LOC105371242A0A075B767 164 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 TRAV1-2A0A0B4J238 106 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 TRBV11-1A0A0K0K1C0 115 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms