RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 ZYG11BQ9C0D3 744 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 FAM107BQ9H098 131 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 YARS2Q9Y2Z4 477 aaKnown RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 CACNA1DQ01668 2161 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 ZNF816-ZNF321PA0A0X1KG74 233 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 A0A1W2PS18 150 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 GMNCA6NCL1 334 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 DCTN6O00399 190 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 GABRPO00591 440 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 ZG16O60844 167 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 KLK1P06870 262 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 ZNF35P13682 527 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 OR1E1P30953 314 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 ETV5P41161 510 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 PTGDSP41222 190 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 GSK3BP49841 420 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 NANOS3P60323 173 aaKnown RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 ERVFC1-1P60608 527 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 TSPAN31Q12999 210 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 GLYR1Q49A26 553 aaPredicted RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 GDPGP1Q6ZNW5 385 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 C1QL2Q7Z5L3 287 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 MRPL55Q7Z7F7 128 aaKnown RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 IFNEQ86WN2 208 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 C17orf82Q86X59 251 aaPredicted RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 CBLN2Q8IUK8 224 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 OR2L5Q8NG80 312 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 EBNA1BP2Q99848 306 aaKnown RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 ECSITQ9BQ95 431 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 BCL2L14Q9BZR8 327 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 TRABDQ9H4I3 376 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 IL17CQ9P0M4 197 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 RIMS3Q9UJD0 308 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 FBXL3Q9UKT7 428 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 TP53TG5Q9Y2B4 290 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 RPL36Q9Y3U8 105 aaKnown RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 DOPEY1Q5JWR5 2465 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 USP9YO00507 2555 aaPredicted RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 TRBV7-9A0A0J9YWB2 115 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 GLYATL1P3A0A0U1RQE8 302 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 K7EQD1 137 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 RFXANKO14593 260 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 TNFSF11O14788 317 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 PIAS1O75925 651 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 AP2A2O94973 939 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 IGLV3-27P01718 113 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 ZNF17P17021 662 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 PGAM1P18669 254 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 CCNOP22674 350 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 FASP25445 335 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 MAGEA3P43357 314 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 RPL29P47914 159 aaKnown RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 CLDN6P56747 220 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 OR10A3P58181 314 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 CRADDP78560 199 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 STX3Q13277 289 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 FHL1Q13642 323 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 DGUOKQ16854 277 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 PARP15Q460N3 678 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 TNFAIP8L3Q5GJ75 292 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 NHLRC3Q5JS37 347 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 MARC1Q5VT66 337 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 FBXL22Q6P050 247 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 Q6ZT83 130 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 ZNF546Q86UE3 836 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 PRIMA1Q86XR5 153 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 UMODL1-AS1Q8N2C9 162 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 DEFB119Q8N690 84 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 OR51F2Q8NH61 342 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 OR9G1Q8NH87 305 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 PHF10Q8WUB8 498 aaKnown RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 PPP1R36Q96LQ0 422 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 C7orf50Q9BRJ6 194 aaKnown RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 NSRP1Q9H0G5 558 aaKnown RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 RANBP3Q9H6Z4 567 aaPredicted RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 SH2D2AQ9NP31 389 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 RBM22Q9NW64 420 aaKnown RBP eCLIP2.04□□□□□ -2.08
MCF2-204ENST00000414978 NEU3Q9UQ49 428 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 PRRC2AP48634 2157 aaKnown RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 DOCK4Q8N1I0 1966 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 VPS13AQ96RL7 3174 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 IGLV3-10A0A075B6K4 115 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 TMEM210A6NLX4 147 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 C15orf61A6NNL5 157 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 BLOC1S5-TXNDC5H3BN57 136 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 K7EMT4 169 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 SULT1C2O00338 296 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 IDH3BO43837 385 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 RAD1O60671 282 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 MPDU1O75352 247 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 SPAG7O75391 227 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 RCBTB2O95199 551 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 VENTXO95231 258 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 FAM107AO95990 144 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 EIF4EP06730 217 aaKnown RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 SNRPAP09012 282 aaKnown RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 PRDX3P30048 256 aaKnown RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 CALCRP30988 508 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 UGT2B10P36537 528 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 SPAM1P38567 509 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms