RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 OR4C45A6NMZ5 311 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 LGALS8O00214 317 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 SLC1A7O00341 560 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 XPNPEP2O43895 674 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 FOXH1O75593 365 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 CYB5R3P00387 301 aaPredicted RBP12.31□□□□□ -0.44
LIMS1-206ENST00000414829 CD2P06729 351 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 MSMBP08118 114 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 OCM2P0CE71 109 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 OCMP0CE72 109 aaPredicted RBP12.31□□□□□ -0.44
LIMS1-206ENST00000414829 ZNF16P17020 682 aaPredicted RBP12.31□□□□□ -0.44
LIMS1-206ENST00000414829 GATA3P23771 443 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 GPM6AP51674 278 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 MPPED2Q15777 294 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 ZNF404Q494X3 552 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 ESCO2Q56NI9 601 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 FAM76BQ5HYJ3 339 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 RNLSQ5VYX0 342 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 DCDC5Q6ZRR9 648 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 MOB3CQ70IA8 216 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 OR13C3Q8NGS6 347 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 ZNF671Q8TAW3 534 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 THRSPQ92748 146 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 SPSB1Q96BD6 273 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 MSI2Q96DH6 328 aaKnown RBP12.31□□□□□ -0.44
LIMS1-206ENST00000414829 CPNE2Q96FN4 548 aaPredicted RBP12.31□□□□□ -0.44
LIMS1-206ENST00000414829 SMR3AQ99954 134 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 ISG20L2Q9H9L3 353 aaKnown RBP12.31□□□□□ -0.44
LIMS1-206ENST00000414829 BABAM2Q9NXR7 383 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 LPAR3Q9UBY5 353 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 LRCH1Q9Y2L9 728 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 PCDHGB5Q9Y5G0 923 aa12.31□□□□□ -0.44
LIMS1-206ENST00000414829 VPS13CQ709C8 3753 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 OOEPA6NGQ2 149 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 ZNF732B4DXR9 585 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 RPS2P15880 293 aaKnown RBP12.3□□□□□ -0.44
LIMS1-206ENST00000414829 MUC1P15941 1255 aaPredicted RBP12.3□□□□□ -0.44
LIMS1-206ENST00000414829 PRKACBP22694 351 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 ETV1P50549 477 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 DVL1P1P54792 670 aaPredicted RBP12.3□□□□□ -0.44
LIMS1-206ENST00000414829 NANOS3P60323 173 aaKnown RBP12.3□□□□□ -0.44
LIMS1-206ENST00000414829 LMO4P61968 165 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 KRTAP1-1Q07627 177 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 CDK5R1Q15078 307 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 MICBQ29980 383 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 CEP78Q5JTW2 689 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 UTS2BQ765I0 119 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 OR8B3Q8NGG8 313 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 LRRC29Q8WV35 223 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 PPP1R14AQ96A00 147 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 SMIM19Q96E16 107 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 OR8B2Q96RD0 313 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 MND1Q9BWT6 205 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 GSX1Q9H4S2 264 aaPredicted RBP12.3□□□□□ -0.44
LIMS1-206ENST00000414829 PATZ1Q9HBE1 687 aaKnown RBP12.3□□□□□ -0.44
LIMS1-206ENST00000414829 YAE1D1Q9NRH1 226 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 FKBP14Q9NWM8 211 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 DHDHQ9UQ10 334 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 ACANP16112 2415 aa12.3□□□□□ -0.44
LIMS1-206ENST00000414829 ZNF469Q96JG9 3925 aaPredicted RBP12.29□□□□□ -0.44
LIMS1-206ENST00000414829 CEACAM18A8MTB9 384 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 J3QT63 122 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 LMX1BO60663 402 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 ZFPL1O95159 310 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 TGFAP01135 160 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 CDK1P06493 297 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 PMELP40967 661 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 FUT6P51993 359 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 WNT4P56705 351 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 BDH1Q02338 343 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 RBM48Q5RL73 367 aaKnown RBP12.29□□□□□ -0.44
LIMS1-206ENST00000414829 WDR82Q6UXN9 313 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 WDR86Q86TI4 376 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 DNAAF1Q8NEP3 725 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 OR5D14Q8NGL3 314 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 GPR148Q8TDV2 347 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 TSEN15Q8WW01 171 aaKnown RBP12.29□□□□□ -0.44
LIMS1-206ENST00000414829 RNF166Q96A37 237 aaPredicted RBP12.29□□□□□ -0.44
LIMS1-206ENST00000414829 NEIL1Q96FI4 390 aaPredicted RBP12.29□□□□□ -0.44
LIMS1-206ENST00000414829 CNBD2Q96M20 576 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 DCAF16Q9NXF7 216 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 ERVK-18Q9QC07 812 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 DNAJB11Q9UBS4 358 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 CDC42EP3Q9UKI2 254 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 HIVEP2P31629 2446 aa12.29□□□□□ -0.44
LIMS1-206ENST00000414829 MAP1AP78559 2803 aaPredicted RBP12.29□□□□□ -0.44
LIMS1-206ENST00000414829 MED13LQ71F56 2210 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 PPIAL4CA0A0B4J2A2 164 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 A0A0G2JMP0 313 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 A0A0X1KG70 313 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 PQLC2LA1A4F0 135 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 SRRM5B3KS81 715 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 F5H0A9 414 aaPredicted RBP12.28□□□□□ -0.44
LIMS1-206ENST00000414829 CDIPTO14735 213 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 LHBP01229 141 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 IL2RGP31785 369 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 THBS2P35442 1172 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 NPY4RP50391 375 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 C11orf91Q3C1V1 193 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 OR2G6Q5TZ20 316 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms