RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 MOB3CQ70IA8 216 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 C22orf15Q8WYQ4 148 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 RORBQ92753 470 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 STMN2Q93045 179 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 ITFG2Q969R8 447 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 RNFT2Q96EX2 444 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 NUDT16L1Q9BRJ7 211 aaKnown RBP12.32□□□□□ -0.44
LIMS4-201ENST00000413601 C19orf24Q9BVV8 132 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 WDR13Q9H1Z4 485 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 SMURF1Q9HCE7 757 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 ENPP5Q9UJA9 477 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 COL6A5A8TX70 2615 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 A6NIN4 97 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 SRRM5B3KS81 715 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 C22orf46C9J442 243 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 H3BSH0 61 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 TMPRSS2O15393 492 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 AKR7A2O43488 359 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 FCN3O75636 299 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 SULT1C4O75897 302 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 NRASP01111 189 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 MUC1P15941 1255 aaPredicted RBP12.31□□□□□ -0.44
LIMS4-201ENST00000413601 GNG3P63215 75 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 TP53I3Q53FA7 332 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 KLF17Q5JT82 389 aaPredicted RBP12.31□□□□□ -0.44
LIMS4-201ENST00000413601 PLCXD3Q63HM9 321 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 CATSPERDQ86XM0 798 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 ENTHD1Q8IYW4 607 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 OR5T2Q8NGG2 359 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 OR5A2Q8NGI9 324 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 OR10Z1Q8NGY1 313 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 ZNF418Q8TF45 676 aaPredicted RBP12.31□□□□□ -0.44
LIMS4-201ENST00000413601 CCL13Q99616 98 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 SLC6A7Q99884 636 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 OR51I2Q9H344 312 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 GNG8Q9UK08 70 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 V9GYS6 101 aa12.31□□□□□ -0.44
LIMS4-201ENST00000413601 A0A0A6YYJ9 748 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 LOC100130705A0A1B0GUX0 176 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 A0A1B0GW55 424 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 DAPL1A0PJW8 107 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 J3QRE1 110 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 DVL1O14640 695 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 RHBDL1O75783 438 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 DUX4L2P0CJ85 424 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 DUX4L3P0CJ86 424 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 DUX4L4P0CJ87 422 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 DUX4L5P0CJ88 424 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 DUX4L6P0CJ89 424 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 DUX4L7P0CJ90 424 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 GABRB1P18505 474 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 WDR38Q5JTN6 314 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 DUX4L9Q6RFH8 374 aaPredicted RBP12.3□□□□□ -0.44
LIMS4-201ENST00000413601 PRSS35Q8N3Z0 413 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 FGFRL1Q8N441 504 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 BPIFB2Q8N4F0 458 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 OR14K1Q8NGZ2 314 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 GPR173Q9NS66 373 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 SNTG1Q9NSN8 517 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 ACOXLQ9NUZ1 547 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 FAM118AQ9NWS6 357 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 KAAG1Q9UBP8 84 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 DNAJB11Q9UBS4 358 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 DUX4Q9UBX2 424 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 NUP50Q9UKX7 468 aa12.3□□□□□ -0.44
LIMS4-201ENST00000413601 IGHV3OR16-10A0A075B7F0 116 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 OR5B21A6NL26 309 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 ENSAO43768 121 aaKnown RBP12.29□□□□□ -0.44
LIMS4-201ENST00000413601 TFF1P04155 84 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 FPR2P25090 351 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 ISL1P61371 349 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 ACTC1P68032 377 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 ACTA1P68133 377 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 ZSCAN26Q16670 478 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 CLVS2Q5SYC1 327 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 CD276Q5ZPR3 534 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 TMEM42Q69YG0 159 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 Q6ZSR3 168 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 DOK3Q7L591 496 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 FAM220AQ7Z4H9 259 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 FAM216BQ8N7L0 139 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 RHOXF1Q8NHV9 184 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 ST8SIA4Q92187 359 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 RNF166Q96A37 237 aaPredicted RBP12.29□□□□□ -0.44
LIMS4-201ENST00000413601 SUCNR1Q9BXA5 334 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 ZNF69Q9UC07 566 aa12.29□□□□□ -0.44
LIMS4-201ENST00000413601 EXOGQ9Y2C4 368 aaKnown RBP12.29□□□□□ -0.44
LIMS4-201ENST00000413601 A0A1B0GVI7 797 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 SNTNA6NMZ2 147 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 DLGAP1O14490 977 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 SYT7O43581 403 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 MPZL2O60487 215 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 PPIAL4GP0DN37 164 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 IGHV4-38-2P0DP08 117 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 AMY2BP19961 511 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 CCL1P22362 96 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 KIR3DL2P43630 455 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 OR12D2P58182 307 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 HILS1P60008 231 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 FGF12P61328 243 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms