RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 SAP25Q8TEE9 199 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 HLA-CQ95604 372 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 ALKBH3Q96Q83 286 aaPredicted RBP12.13□□□□□ -0.47
NUB1-201ENST00000413040 RNF126Q9BV68 326 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 SMIM3Q9BZL3 60 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 FANCFQ9NPI8 374 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 GLS2Q9UI32 602 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 C14orf166Q9Y224 244 aaKnown RBP12.13□□□□□ -0.47
NUB1-201ENST00000413040 LY6G6EA0A0G2JKS1 128 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 DHRS3O75911 302 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 RRADP55042 308 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 SNAI3Q3KNW1 292 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 AKIRIN2Q53H80 203 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 PEG10Q86TG7 708 aaKnown RBP12.12□□□□□ -0.47
NUB1-201ENST00000413040 PIK3IP1Q96FE7 263 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 SCGB3A2Q96PL1 93 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 PECRQ9BY49 303 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 U3KQA8 63 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 SHANK1Q9Y566 2161 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 EXPH5Q8NEV8 1989 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 ADAMTS9Q9P2N4 1935 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 GPR179Q6PRD1 2367 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 NSG1A0A0A6YYJ2 146 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 A0A0J9YW62 118 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 ZNF705EA8MWA4 302 aaPredicted RBP12.12□□□□□ -0.47
NUB1-201ENST00000413040 FBXO24O75426 580 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 HLA-GP17693 338 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 RBMXP38159 391 aaKnown RBP12.12□□□□□ -0.47
NUB1-201ENST00000413040 ZNF84P51523 738 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 FXYD4P59646 89 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 ENDOGQ14249 297 aaKnown RBP12.12□□□□□ -0.47
NUB1-201ENST00000413040 ZNF468Q5VIY5 522 aaPredicted RBP12.12□□□□□ -0.47
NUB1-201ENST00000413040 AKR7LQ8NHP1 331 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 ZNF2Q9BSG1 426 aaPredicted RBP12.12□□□□□ -0.47
NUB1-201ENST00000413040 PISDQ9UG56 409 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 DNAJC13O75165 2243 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 IGKV1D-8A0A087WSZ0 117 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 ETV2O00321 342 aaPredicted RBP12.12□□□□□ -0.47
NUB1-201ENST00000413040 F12P00748 615 aaPredicted RBP12.12□□□□□ -0.47
NUB1-201ENST00000413040 IGHV3-9P01782 118 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 NR2C1P13056 603 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 CPT2P23786 658 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 SSR4P51571 173 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 FAM189A2Q15884 450 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 ACTBL2Q562R1 376 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 VAX1Q5SQQ9 334 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 MRPL14Q6P1L8 145 aaKnown RBP12.12□□□□□ -0.47
NUB1-201ENST00000413040 TFAP2EQ6VUC0 442 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 ESX1Q8N693 406 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 OR9K2Q8NGE7 335 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 OR14L1PQ8NHC6 308 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 PIGQQ9BRB3 760 aa12.12□□□□□ -0.47
NUB1-201ENST00000413040 F8W036 122 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 MTRF1O75570 445 aaKnown RBP12.11□□□□□ -0.47
NUB1-201ENST00000413040 FPR2P25090 351 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 OTX2P32243 289 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 RPS18P62269 152 aaKnown RBP12.11□□□□□ -0.47
NUB1-201ENST00000413040 SUPT4H1P63272 117 aaKnown RBP12.11□□□□□ -0.47
NUB1-201ENST00000413040 BLOC1S1P78537 153 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 MAML2Q8IZL2 1156 aaPredicted RBP12.11□□□□□ -0.47
NUB1-201ENST00000413040 FADS6Q8N9I5 356 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 ADPRHL1Q8NDY3 354 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 DYRK2Q92630 601 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 NAT6Q93015 286 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 RTBDNQ9BSG5 229 aaPredicted RBP12.11□□□□□ -0.47
NUB1-201ENST00000413040 NAA11Q9BSU3 229 aaPredicted RBP12.11□□□□□ -0.47
NUB1-201ENST00000413040 FAAP24Q9BTP7 215 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 NKX6-2Q9C056 277 aaPredicted RBP12.11□□□□□ -0.47
NUB1-201ENST00000413040 PIGMQ9H3S5 423 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 ZNF581Q9P0T4 197 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 IGLV3-32A0A0A0MS00 114 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 ZNF850A8MQ14 1090 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 B4GALT1P15291 398 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 ADH6P28332 368 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 RSU1Q15404 277 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 LPAL2Q16609 132 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 PNLIPRP3Q17RR3 467 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 IAH1Q2TAA2 248 aaPredicted RBP12.11□□□□□ -0.47
NUB1-201ENST00000413040 SP6Q3SY56 376 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 OR52H1Q8NGJ2 320 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 SPTSSAQ969W0 71 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 PARP12Q9H0J9 701 aaKnown RBP12.11□□□□□ -0.47
NUB1-201ENST00000413040 BARX1Q9HBU1 254 aaPredicted RBP12.11□□□□□ -0.47
NUB1-201ENST00000413040 MCTS1Q9ULC4 181 aaKnown RBP12.11□□□□□ -0.47
NUB1-201ENST00000413040 LSM5Q9Y4Y9 91 aaKnown RBP12.11□□□□□ -0.47
NUB1-201ENST00000413040 HS3ST3B1Q9Y662 390 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 FREM2Q5SZK8 3169 aa12.11□□□□□ -0.47
NUB1-201ENST00000413040 TAS2R46P59540 309 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 LSM6P62312 80 aaKnown RBP12.1□□□□□ -0.47
NUB1-201ENST00000413040 SRSF4Q08170 494 aaKnown RBP12.1□□□□□ -0.47
NUB1-201ENST00000413040 PLEKHN1Q494U1 663 aaPredicted RBP12.1□□□□□ -0.47
NUB1-201ENST00000413040 AADACL3Q5VUY0 350 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 ZNF774Q6NX45 483 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 EIF4E3Q8N5X7 224 aaKnown RBP12.1□□□□□ -0.47
NUB1-201ENST00000413040 MAFAQ8NHW3 353 aaPredicted RBP12.1□□□□□ -0.47
NUB1-201ENST00000413040 FBXO17Q96EF6 278 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 CRLF2Q9HC73 371 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 FBLN5Q9UBX5 448 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 WDFY4Q6ZS81 3184 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 DHRS7CA6NNS2 312 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms