RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 BPIFCQ8NFQ6 507 aa13.91□□□□□ -0.18
HOXD3-202ENST00000410016 DCUN1D4Q92564 292 aa13.91□□□□□ -0.18
HOXD3-202ENST00000410016 HAS2Q92819 552 aa13.91□□□□□ -0.18
HOXD3-202ENST00000410016 FBXO17Q96EF6 278 aa13.91□□□□□ -0.18
HOXD3-202ENST00000410016 RBM24Q9BX46 236 aaKnown RBP13.91□□□□□ -0.18
HOXD3-202ENST00000410016 CYTL1Q9NRR1 136 aa13.91□□□□□ -0.18
HOXD3-202ENST00000410016 PTRH2Q9Y3E5 179 aaKnown RBP13.91□□□□□ -0.18
HOXD3-202ENST00000410016 PCDHGA1Q9Y5H4 931 aa13.91□□□□□ -0.18
HOXD3-202ENST00000410016 A0A0J9YW62 118 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 NPIPA2E9PIF3 369 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 NPIPA3F8WFD2 350 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 HPNP05981 417 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 LYL1P12980 280 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 FAM122CQ6P4D5 195 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 Q7L0L9 218 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 BHLHE23Q8NDY6 225 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 RHBDD1Q8TEB9 315 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 MAFIPQ8WZ33 124 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 SCGB3A2Q96PL1 93 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 MICU1Q9BPX6 476 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 PIGLQ9Y2B2 252 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 SERPINE3A8MV23 424 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 FGF16O43320 207 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 HTR3BO95264 441 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 KLK3P07288 261 aaPredicted RBP13.9□□□□□ -0.18
HOXD3-202ENST00000410016 FCGR2AP12318 317 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 CCL4P13236 92 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 SERPINA2P20848 420 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 OR3A2P47893 321 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 CSNK2A1P68400 391 aaPredicted RBP13.9□□□□□ -0.18
HOXD3-202ENST00000410016 IL15RAQ13261 267 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 NSUN5P2Q63ZY6 315 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 LINC00469Q8N7U9 141 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 CSNK2A3Q8NEV1 391 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 SLC30A7Q8NEW0 376 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 OR52H1Q8NGJ2 320 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 M1APQ8TC57 530 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 PCDHB10Q9UN67 800 aa13.9□□□□□ -0.18
HOXD3-202ENST00000410016 M0R135 149 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 NUPL2O15504 423 aaKnown RBP13.89□□□□□ -0.19
HOXD3-202ENST00000410016 SSR4P51571 173 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 TAS2R46P59540 309 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 NAAAQ02083 359 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 SNAI3Q3KNW1 292 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 TMEM17Q86X19 198 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 OR1S2Q8NGQ3 325 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 MR1Q95460 341 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 MARC2Q969Z3 335 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 SGK3Q96BR1 496 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 C10orf35Q96D05 121 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 ZNF799Q96GE5 643 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 OR10C1Q96KK4 312 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 CDC6Q99741 560 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 PIGMQ9H3S5 423 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 TMEM100Q9NV29 134 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 CNTRLQ7Z7A1 2325 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 MYO7BQ6PIF6 2116 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 IGKV1D-8A0A087WSZ0 117 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 MSGN1A6NI15 193 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 RAC1P63000 192 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 ZNF468Q5VIY5 522 aaPredicted RBP13.89□□□□□ -0.19
HOXD3-202ENST00000410016 FAM27BQ5VT28 67 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 JSRP1Q96MG2 331 aaPredicted RBP13.89□□□□□ -0.19
HOXD3-202ENST00000410016 PIGQQ9BRB3 760 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 NAA11Q9BSU3 229 aaPredicted RBP13.89□□□□□ -0.19
HOXD3-202ENST00000410016 SRXN1Q9BYN0 137 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 PLEK2Q9NYT0 353 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 EHFQ9NZC4 300 aa13.89□□□□□ -0.19
HOXD3-202ENST00000410016 TNRC18O15417 2968 aaPredicted RBP13.89□□□□□ -0.19
HOXD3-202ENST00000410016 MASP2O00187 686 aa13.88□□□□□ -0.19
HOXD3-202ENST00000410016 TNFSF11O14788 317 aa13.88□□□□□ -0.19
HOXD3-202ENST00000410016 NTF4P34130 210 aa13.88□□□□□ -0.19
HOXD3-202ENST00000410016 RPS19BP1Q86WX3 136 aaKnown RBP13.88□□□□□ -0.19
HOXD3-202ENST00000410016 BAP18Q8IXM2 172 aa13.88□□□□□ -0.19
HOXD3-202ENST00000410016 C20orf196Q8IYI0 205 aa13.88□□□□□ -0.19
HOXD3-202ENST00000410016 AGBL5Q8NDL9 886 aa13.88□□□□□ -0.19
HOXD3-202ENST00000410016 PIGTQ969N2 578 aa13.88□□□□□ -0.19
HOXD3-202ENST00000410016 INTS12Q96CB8 462 aaKnown RBP13.88□□□□□ -0.19
HOXD3-202ENST00000410016 PRO3102Q9H379 93 aa13.88□□□□□ -0.19
HOXD3-202ENST00000410016 OR5AC2Q9NZP5 309 aa13.88□□□□□ -0.19
HOXD3-202ENST00000410016 MCTS1Q9ULC4 181 aaKnown RBP13.88□□□□□ -0.19
HOXD3-202ENST00000410016 NTN3O00634 580 aaPredicted RBP13.88□□□□□ -0.19
HOXD3-202ENST00000410016 CA11O75493 328 aa13.88□□□□□ -0.19
HOXD3-202ENST00000410016 CRYGSP22914 178 aa13.88□□□□□ -0.19
HOXD3-202ENST00000410016 CPT2P23786 658 aa13.88□□□□□ -0.19
HOXD3-202ENST00000410016 ACKR3P25106 362 aa13.88□□□□□ -0.19
HOXD3-202ENST00000410016 MRPS34P82930 218 aaKnown RBP13.88□□□□□ -0.19
HOXD3-202ENST00000410016 PRSS54Q6PEW0 395 aa13.88□□□□□ -0.19
HOXD3-202ENST00000410016 C6orf201Q7Z4U5 140 aa13.88□□□□□ -0.19
HOXD3-202ENST00000410016 MAML2Q8IZL2 1156 aaPredicted RBP13.88□□□□□ -0.19
HOXD3-202ENST00000410016 BOLLQ8N9W6 283 aaKnown RBP13.88□□□□□ -0.19
HOXD3-202ENST00000410016 LRRC46Q96FV0 321 aa13.88□□□□□ -0.19
HOXD3-202ENST00000410016 ULBP2Q9BZM5 246 aa13.88□□□□□ -0.19
HOXD3-202ENST00000410016 TMEM265A0A087WTH1 108 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 CCDC163A0A0D9SF12 145 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 FIGNL2A6NMB9 653 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 DNASE2O00115 360 aaPredicted RBP13.87□□□□□ -0.19
HOXD3-202ENST00000410016 CBR3O75828 277 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 CD79AP11912 226 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 TPT1P13693 172 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms