RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 ZNF775Q96BV0 537 aaPredicted RBP14.65□□□□□ -0.06
LIMS2-208ENST00000410011 ZNF160Q9HCG1 818 aa14.65□□□□□ -0.06
LIMS2-208ENST00000410011 C1orf123Q9NWV4 160 aa14.65□□□□□ -0.06
LIMS2-208ENST00000410011 CA14Q9ULX7 337 aa14.65□□□□□ -0.06
LIMS2-208ENST00000410011 ZNF705EA8MWA4 302 aaPredicted RBP14.64□□□□□ -0.07
LIMS2-208ENST00000410011 TP53I11O14683 189 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 VAMP5O95183 116 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 HPNP05981 417 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 CAV2P51636 162 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 UBE2V2Q15819 145 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 HAGHLQ6PII5 290 aaPredicted RBP14.64□□□□□ -0.07
LIMS2-208ENST00000410011 TLNRD1Q9H1K6 362 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 ZNF576Q9H609 170 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 EDARQ9UNE0 448 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 C14orf166Q9Y224 244 aaKnown RBP14.64□□□□□ -0.07
LIMS2-208ENST00000410011 PCDHGA1Q9Y5H4 931 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 CHCHD2Q9Y6H1 151 aaPredicted RBP14.64□□□□□ -0.07
LIMS2-208ENST00000410011 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 PMS2P1A4D2B8 440 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 STMND1H3BQB6 276 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 MTRF1O75570 445 aaKnown RBP14.64□□□□□ -0.07
LIMS2-208ENST00000410011 IFNA2P01563 188 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 OPN1LWP04000 364 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 PI3P19957 117 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 CLDN17P56750 224 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 ENDOGQ14249 297 aaKnown RBP14.64□□□□□ -0.07
LIMS2-208ENST00000410011 SHBQ15464 509 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 CHRFAM7AQ494W8 412 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 H3F3CQ6NXT2 135 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 CRB3Q9BUF7 120 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 DEFB126Q9BYW3 111 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 CNTNAP3Q9BZ76 1288 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 POMT1Q9Y6A1 747 aa14.64□□□□□ -0.07
LIMS2-208ENST00000410011 USP34Q70CQ2 3546 aa14.63□□□□□ -0.07
LIMS2-208ENST00000410011 ABCA7Q8IZY2 2146 aa14.63□□□□□ -0.07
LIMS2-208ENST00000410011 DHRS7CA6NNS2 312 aa14.63□□□□□ -0.07
LIMS2-208ENST00000410011 EIF1BO60739 113 aaKnown RBP14.63□□□□□ -0.07
LIMS2-208ENST00000410011 GAPDHP04406 335 aaKnown RBP14.63□□□□□ -0.07
LIMS2-208ENST00000410011 CTSDP07339 412 aaPredicted RBP14.63□□□□□ -0.07
LIMS2-208ENST00000410011 CSNK1A1P48729 337 aa14.63□□□□□ -0.07
LIMS2-208ENST00000410011 RSPO1Q2MKA7 263 aaPredicted RBP14.63□□□□□ -0.07
LIMS2-208ENST00000410011 RAB11FIP2Q7L804 512 aa14.63□□□□□ -0.07
LIMS2-208ENST00000410011 BHLHE23Q8NDY6 225 aa14.63□□□□□ -0.07
LIMS2-208ENST00000410011 INTS12Q96CB8 462 aaKnown RBP14.63□□□□□ -0.07
LIMS2-208ENST00000410011 ACKR4Q9NPB9 350 aa14.63□□□□□ -0.07
LIMS2-208ENST00000410011 TUBD1Q9UJT1 453 aa14.63□□□□□ -0.07
LIMS2-208ENST00000410011 CEP192Q8TEP8 1941 aa14.63□□□□□ -0.07
LIMS2-208ENST00000410011 SDCBPO00560 298 aaPredicted RBP14.63□□□□□ -0.07
LIMS2-208ENST00000410011 HKR1P10072 659 aa14.63□□□□□ -0.07
LIMS2-208ENST00000410011 SFTPDP35247 375 aa14.63□□□□□ -0.07
LIMS2-208ENST00000410011 AKR1C2P52895 323 aa14.63□□□□□ -0.07
LIMS2-208ENST00000410011 SRSF3P84103 164 aaKnown RBP14.63□□□□□ -0.07
LIMS2-208ENST00000410011 AKR1C1Q04828 323 aa14.63□□□□□ -0.07
LIMS2-208ENST00000410011 NABP1Q96AH0 204 aa14.63□□□□□ -0.07
LIMS2-208ENST00000410011 SHDQ96IW2 340 aa14.63□□□□□ -0.07
LIMS2-208ENST00000410011 S100A13Q99584 98 aa14.63□□□□□ -0.07
LIMS2-208ENST00000410011 HTR3BO95264 441 aa14.62□□□□□ -0.07
LIMS2-208ENST00000410011 CST4P01036 141 aa14.62□□□□□ -0.07
LIMS2-208ENST00000410011 SULT1A2P50226 295 aa14.62□□□□□ -0.07
LIMS2-208ENST00000410011 SUCLG1P53597 346 aaKnown RBP14.62□□□□□ -0.07
LIMS2-208ENST00000410011 RBM39Q14498 530 aaKnown RBP14.62□□□□□ -0.07
LIMS2-208ENST00000410011 MRPL14Q6P1L8 145 aaKnown RBP14.62□□□□□ -0.07
LIMS2-208ENST00000410011 NTNG2Q96CW9 530 aa14.62□□□□□ -0.07
LIMS2-208ENST00000410011 DUSP23Q9BVJ7 150 aa14.62□□□□□ -0.07
LIMS2-208ENST00000410011 RHOFQ9HBH0 211 aa14.62□□□□□ -0.07
LIMS2-208ENST00000410011 TAF9BQ9HBM6 251 aa14.62□□□□□ -0.07
LIMS2-208ENST00000410011 RCC2Q9P258 522 aaKnown RBP14.62□□□□□ -0.07
LIMS2-208ENST00000410011 RBMXP38159 391 aaKnown RBP14.61□□□□□ -0.07
LIMS2-208ENST00000410011 SMAD2Q15796 467 aaKnown RBP14.61□□□□□ -0.07
LIMS2-208ENST00000410011 OR51F2Q8NH61 342 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 LIN37Q96GY3 246 aaPredicted RBP14.61□□□□□ -0.07
LIMS2-208ENST00000410011 NRIP2Q9BQI9 281 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 TREM1Q9NP99 234 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 HSF4Q9ULV5 492 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 LOC102723996A0A087X1L8 192 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 C5orf63A6NC05 138 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 JTBO76095 146 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 CD5P06127 495 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 FCGR2AP12318 317 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 ZNF708P17019 499 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 PVALBP20472 110 aaPredicted RBP14.61□□□□□ -0.07
LIMS2-208ENST00000410011 PTGER4P35408 488 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 HOXA1P49639 335 aaPredicted RBP14.61□□□□□ -0.07
LIMS2-208ENST00000410011 TMEM268Q5VZI3 342 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 SGPP2Q8IWX5 399 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 SPEM1Q8N4L4 309 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 LYPD6BQ8NI32 183 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 Q96M66 194 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 MICU1Q9BPX6 476 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 PARP11Q9NR21 331 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 PRR13Q9NZ81 148 aa14.61□□□□□ -0.07
LIMS2-208ENST00000410011 F5H5K5 113 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 KLK2P20151 261 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 SERPINA2P20848 420 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 STARD6P59095 220 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 BTNL8Q6UX41 500 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 SULF2Q8IWU5 870 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 TMEM123Q8N131 208 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 SEMA6DQ8NFY4 1073 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 OR5D18Q8NGL1 313 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms