RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 RCBTB2O95199 551 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 CLIC3O95833 236 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 TXNDC12O95881 172 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 ACTL6AO96019 429 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 IGHMP01871 453 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 ZNF24P17028 368 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 CCNA2P20248 432 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 GRPRP30550 384 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 GGT2P36268 569 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 RFC3P40938 356 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 STARP49675 285 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 LHX2P50458 406 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 TDGF1P3P51864 188 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 SUCLG1P53597 346 aaKnown RBP3.46□□□□□ -1.86
CLK1-203ENST00000409769 CLDN17P56750 224 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 NUP107P57740 925 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 PRPS1P60891 318 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 PPIAP62937 165 aaKnown RBP3.46□□□□□ -1.86
CLK1-203ENST00000409769 IL1RL1Q01638 556 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 PLGLB1Q02325 96 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 RPL18Q07020 188 aaKnown RBP3.46□□□□□ -1.86
CLK1-203ENST00000409769 ZP4Q12836 540 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 RIGQ13278 110 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 GINS1Q14691 196 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 SLC10A1Q14973 349 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 OR7A5Q15622 319 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 BCL2A1Q16548 175 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 PGGHGQ32M88 737 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 MS4A18Q3C1V0 323 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 KRTAP13-3Q3SY46 172 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 TMEM176BQ3YBM2 270 aaPredicted RBP3.46□□□□□ -1.86
CLK1-203ENST00000409769 ZBED5Q49AG3 693 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 NADK2Q4G0N4 442 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 TMEM236Q5W0B7 351 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 LAIR2Q6ISS4 152 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 ACSM5Q6NUN0 579 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 ZNF343Q6P1L6 599 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 SLC27A4Q6P1M0 643 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 SMARCD3Q6STE5 483 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 PAQR6Q6TCH4 344 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 GDPGP1Q6ZNW5 385 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 OAFQ86UD1 273 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 ENTHD1Q8IYW4 607 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 OR5J2Q8NH18 312 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 NEIL3Q8TAT5 605 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 C11orf45Q8TAV5 145 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 FANK1Q8TC84 345 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 APH1BQ8WW43 257 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 OSTF1Q92882 214 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 PNPLA2Q96AD5 504 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 SAMD8Q96LT4 415 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 OR5B2Q96R09 309 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 TNFRSF13CQ96RJ3 184 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 TSSK6Q9BXA6 273 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 SRXN1Q9BYN0 137 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 RIBC2Q9H4K1 309 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 TMEM185BQ9H7F4 350 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 RNF121Q9H920 327 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 RPS10P5Q9NQ39 176 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 NANSQ9NR45 359 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 ZNF226Q9NYT6 803 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 TAS2R5Q9NYW4 299 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 UBAP1Q9NZ09 502 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 SPRR3Q9UBC9 169 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 SEC14L4Q9UDX3 406 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 SLC6A5Q9Y345 797 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 MOB4Q9Y3A3 225 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 ORC6Q9Y5N6 252 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 PCNX1Q96RV3 2341 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 USP24Q9UPU5 2620 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 IGHV4-30-2A0A087WSY4 118 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 A0A087WZ39 114 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 TRGV5A0A0B4J1U4 118 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 H0YC42 278 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 H3BN98 237 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 SULT2B1O00204 365 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 IMPA2O14732 288 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 TNFSF11O14788 317 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 TRAF3IP2O43734 574 aaPredicted RBP3.45□□□□□ -1.86
CLK1-203ENST00000409769 PRKYO43930 277 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 RAMP1O60894 148 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 FCGR3BO75015 233 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 AKR7A3O95154 331 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 OPN1LWP04000 364 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 CD14P08571 375 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 CPN1P15169 458 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 KLK2P20151 261 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 AQP2P41181 271 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 SMSP52788 366 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 CXCR4P61073 352 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 SNRPGP62308 76 aaKnown RBP3.45□□□□□ -1.86
CLK1-203ENST00000409769 SLC35A1P78382 337 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 MYBPC1Q00872 1141 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 PAX8Q06710 450 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 CD47Q08722 323 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 MED21Q13503 144 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 MAD2L1BPQ15013 274 aaPredicted RBP3.45□□□□□ -1.86
CLK1-203ENST00000409769 CLEC12AQ5QGZ9 265 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 SLC25A30Q5SVS4 291 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 SHEQ5VZ18 495 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms