RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 PRSS12P56730 875 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 TSPAN5P62079 268 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 C3AR1Q16581 482 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 TMEM42Q69YG0 159 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 ZNF100Q8IYN0 542 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 PRSS33Q8NF86 280 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 OR4K15Q8NH41 348 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 ATPIF1Q9UII2 106 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 hCG_38984A0A1B0GV85 526 aa17.49■□□□□ 0.39
USP39-204ENST00000409766 PLSCR5A0PG75 271 aa17.49■□□□□ 0.39
USP39-204ENST00000409766 ZNF587BE7ETH6 402 aa17.49■□□□□ 0.39
USP39-204ENST00000409766 GOSR2O14653 212 aa17.49■□□□□ 0.39
USP39-204ENST00000409766 FAM3AP98173 230 aa17.49■□□□□ 0.39
USP39-204ENST00000409766 ZNF92Q03936 586 aa17.49■□□□□ 0.39
USP39-204ENST00000409766 MPPED2Q15777 294 aa17.49■□□□□ 0.39
USP39-204ENST00000409766 C17orf107Q6ZR85 190 aa17.49■□□□□ 0.39
USP39-204ENST00000409766 C1QTNF5Q9BXJ0 243 aa17.49■□□□□ 0.39
USP39-204ENST00000409766 TMEM165Q9HC07 324 aa17.49■□□□□ 0.39
USP39-204ENST00000409766 PMP2P02689 132 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 EDN3P14138 238 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 ZNF24P17028 368 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 SSTR2P30874 369 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 HTR2BP41595 481 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 RRADP55042 308 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 FOXG1P55316 489 aaPredicted RBP17.48■□□□□ 0.39
USP39-204ENST00000409766 ARG2P78540 354 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 RNPS1Q15287 305 aaKnown RBP17.48■□□□□ 0.39
USP39-204ENST00000409766 CNN3Q15417 329 aaKnown RBP17.48■□□□□ 0.39
USP39-204ENST00000409766 MICBQ29980 383 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 CLVS2Q5SYC1 327 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 ZBTB37Q5TC79 503 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 DCAF12L2Q5VW00 463 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 TEX261Q6UWH6 196 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 ZDHHC22Q8N966 263 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 OR8H1Q8NGG4 311 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 FBXW5Q969U6 566 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 TMPRSS13Q9BYE2 586 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 PRDM14Q9GZV8 571 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 ZNF552Q9H707 407 aaPredicted RBP17.48■□□□□ 0.39
USP39-204ENST00000409766 U3KQ87 197 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 IGKV1-27A0A075B6S5 117 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 OR2AT4A6NND4 320 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 PRKACBP22694 351 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 BLVRBP30043 206 aaPredicted RBP17.48■□□□□ 0.39
USP39-204ENST00000409766 DHRS2Q13268 280 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 OR8B8Q15620 311 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 ZNF766Q5HY98 468 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 RNFT1Q5M7Z0 435 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 C9orf135Q5VTT2 229 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 COLCA1Q6ZS62 124 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 SLC25A42Q86VD7 318 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 C12orf45Q8N5I9 185 aaPredicted RBP17.48■□□□□ 0.39
USP39-204ENST00000409766 APH1AQ96BI3 265 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 ELL3Q9HB65 397 aaPredicted RBP17.48■□□□□ 0.39
USP39-204ENST00000409766 ASCL3Q9NQ33 180 aa17.48■□□□□ 0.39
USP39-204ENST00000409766 LOC100509620A0A075B734 347 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 A0A096LPE4 126 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 A0A1W2PPZ6 126 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 F5H5P2 479 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 SLC22A5O76082 557 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 IFNA6P05013 189 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 ZNF35P13682 527 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 CPT2P23786 658 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 CBX5P45973 191 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 ARFRP1Q13795 201 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 VASH2Q86V25 355 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 ST8SIA4Q92187 359 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 SPSB4Q96A44 273 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 PECRQ9BY49 303 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 DEFB127Q9H1M4 99 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 FAM230AA0A1W2PPH8 454 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 XRCC2O43543 280 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 NRASP01111 189 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 TMEM225BP0DP42 221 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 VAX1Q5SQQ9 334 aa17.47■□□□□ 0.39
USP39-204ENST00000409766 CPNE2Q96FN4 548 aaPredicted RBP17.47■□□□□ 0.39
USP39-204ENST00000409766 NKX2-8O15522 239 aa17.46■□□□□ 0.39
USP39-204ENST00000409766 RGS11O94810 467 aa17.46■□□□□ 0.39
USP39-204ENST00000409766 RBP2P50120 134 aa17.46■□□□□ 0.39
USP39-204ENST00000409766 GK2Q14410 553 aaPredicted RBP17.46■□□□□ 0.39
USP39-204ENST00000409766 ACTBL2Q562R1 376 aa17.46■□□□□ 0.39
USP39-204ENST00000409766 ZNF680Q8NEM1 530 aa17.46■□□□□ 0.39
USP39-204ENST00000409766 ASB13Q8WXK3 278 aa17.46■□□□□ 0.39
USP39-204ENST00000409766 Q96M66 194 aa17.46■□□□□ 0.39
USP39-204ENST00000409766 FN3KRPQ9HA64 309 aa17.46■□□□□ 0.39
USP39-204ENST00000409766 ARHGAP21Q5T5U3 1957 aa17.46■□□□□ 0.39
USP39-204ENST00000409766 SERPINE3A8MV23 424 aa17.45■□□□□ 0.38
USP39-204ENST00000409766 MPC2O95563 127 aa17.45■□□□□ 0.38
USP39-204ENST00000409766 HLA-HP01893 362 aa17.45■□□□□ 0.38
USP39-204ENST00000409766 ZBTB25P24278 435 aa17.45■□□□□ 0.38
USP39-204ENST00000409766 SRSF6Q13247 344 aaKnown RBP17.45■□□□□ 0.38
USP39-204ENST00000409766 C11orf88Q6PI97 169 aa17.45■□□□□ 0.38
USP39-204ENST00000409766 ASCL4Q6XD76 172 aa17.45■□□□□ 0.38
USP39-204ENST00000409766 LHFPL2Q6ZUX7 228 aa17.45■□□□□ 0.38
USP39-204ENST00000409766 TMPRSS7Q7RTY8 843 aa17.45■□□□□ 0.38
USP39-204ENST00000409766 NUFIP2Q7Z417 695 aaKnown RBP17.45■□□□□ 0.38
USP39-204ENST00000409766 HOGA1Q86XE5 327 aa17.45■□□□□ 0.38
USP39-204ENST00000409766 TMEM178AQ8NBL3 297 aa17.45■□□□□ 0.38
USP39-204ENST00000409766 WDYHV1Q96HA8 205 aa17.45■□□□□ 0.38
USP39-204ENST00000409766 METTL9Q9H1A3 318 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms