RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 ZNF75AQ96N20 296 aa12.19□□□□□ -0.46
LIMS2-206ENST00000409754 REPIN1Q9BWE0 567 aaKnown RBP12.19□□□□□ -0.46
LIMS2-206ENST00000409754 TMEM59Q9BXS4 323 aa12.19□□□□□ -0.46
LIMS2-206ENST00000409754 CST11Q9H112 138 aa12.19□□□□□ -0.46
LIMS2-206ENST00000409754 LPAR5Q9H1C0 372 aa12.19□□□□□ -0.46
LIMS2-206ENST00000409754 USP9XQ93008 2570 aaPredicted RBP12.18□□□□□ -0.46
LIMS2-206ENST00000409754 FASNP49327 2511 aaKnown RBP12.18□□□□□ -0.46
LIMS2-206ENST00000409754 MPIG6BO95866 241 aa12.18□□□□□ -0.46
LIMS2-206ENST00000409754 MELTFP08582 738 aa12.18□□□□□ -0.46
LIMS2-206ENST00000409754 CCL2P13500 99 aa12.18□□□□□ -0.46
LIMS2-206ENST00000409754 PTGER4P35408 488 aa12.18□□□□□ -0.46
LIMS2-206ENST00000409754 FAUP35544 74 aaKnown RBP12.18□□□□□ -0.46
LIMS2-206ENST00000409754 RAG2P55895 527 aa12.18□□□□□ -0.46
LIMS2-206ENST00000409754 IGFBP7Q16270 282 aa12.18□□□□□ -0.46
LIMS2-206ENST00000409754 KRTCAP3Q53RY4 240 aa12.18□□□□□ -0.46
LIMS2-206ENST00000409754 LHFPL2Q6ZUX7 228 aa12.18□□□□□ -0.46
LIMS2-206ENST00000409754 BTN2A1Q7KYR7 527 aa12.18□□□□□ -0.46
LIMS2-206ENST00000409754 TMEM104Q8NE00 496 aa12.18□□□□□ -0.46
LIMS2-206ENST00000409754 OR10R2Q8NGX6 335 aa12.18□□□□□ -0.46
LIMS2-206ENST00000409754 TNFAIP8L1Q8WVP5 186 aa12.18□□□□□ -0.46
LIMS2-206ENST00000409754 OPA3Q9H6K4 179 aa12.18□□□□□ -0.46
LIMS2-206ENST00000409754 PLSCR4Q9NRQ2 329 aa12.18□□□□□ -0.46
LIMS2-206ENST00000409754 NUDT15Q9NV35 164 aa12.18□□□□□ -0.46
LIMS2-206ENST00000409754 KCNN3Q9UGI6 736 aa12.18□□□□□ -0.46
LIMS2-206ENST00000409754 ALG5Q9Y673 324 aa12.18□□□□□ -0.46
LIMS2-206ENST00000409754 WIPF3A6NGB9 483 aa12.17□□□□□ -0.46
LIMS2-206ENST00000409754 WDR1O75083 606 aa12.17□□□□□ -0.46
LIMS2-206ENST00000409754 DHFRP00374 187 aa12.17□□□□□ -0.46
LIMS2-206ENST00000409754 COX5AP20674 150 aa12.17□□□□□ -0.46
LIMS2-206ENST00000409754 VEGFCP49767 419 aa12.17□□□□□ -0.46
LIMS2-206ENST00000409754 CCR6P51684 374 aa12.17□□□□□ -0.46
LIMS2-206ENST00000409754 MTCP1P56278 107 aa12.17□□□□□ -0.46
LIMS2-206ENST00000409754 ZP1P60852 638 aa12.17□□□□□ -0.46
LIMS2-206ENST00000409754 UBE2NP61088 152 aaKnown RBP12.17□□□□□ -0.46
LIMS2-206ENST00000409754 GK2Q14410 553 aaPredicted RBP12.17□□□□□ -0.46
LIMS2-206ENST00000409754 GABRA6Q16445 453 aa12.17□□□□□ -0.46
LIMS2-206ENST00000409754 DMRTC1Q5HYR2 192 aa12.17□□□□□ -0.46
LIMS2-206ENST00000409754 VWA1Q6PCB0 445 aa12.17□□□□□ -0.46
LIMS2-206ENST00000409754 Q6ZTK2 550 aa12.17□□□□□ -0.46
LIMS2-206ENST00000409754 C1orf162Q8NEQ5 155 aaPredicted RBP12.17□□□□□ -0.46
LIMS2-206ENST00000409754 OR5D18Q8NGL1 313 aa12.17□□□□□ -0.46
LIMS2-206ENST00000409754 S100A13Q99584 98 aa12.17□□□□□ -0.46
LIMS2-206ENST00000409754 URM1Q9BTM9 101 aaKnown RBP12.17□□□□□ -0.46
LIMS2-206ENST00000409754 ACTR6Q9GZN1 396 aa12.17□□□□□ -0.46
LIMS2-206ENST00000409754 ZNF107Q9UII5 783 aaPredicted RBP12.17□□□□□ -0.46
LIMS2-206ENST00000409754 ING4Q9UNL4 249 aa12.17□□□□□ -0.46
LIMS2-206ENST00000409754 CRTAPO75718 401 aaPredicted RBP12.16□□□□□ -0.46
LIMS2-206ENST00000409754 RAD51DO75771 328 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 TNFSF13O75888 250 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 CCNKO75909 580 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 CRHP06850 196 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 PSMB1P20618 241 aaKnown RBP12.16□□□□□ -0.46
LIMS2-206ENST00000409754 RBP2P50120 134 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 FUT6P51993 359 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 FOXF2Q12947 444 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 EIF2S3LQ2VIR3 472 aaKnown RBP12.16□□□□□ -0.46
LIMS2-206ENST00000409754 CDNFQ49AH0 187 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 SLC22A6Q4U2R8 563 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 TMEM255AQ5JRV8 349 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 FAM180AQ6UWF9 173 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 SEM1Q6ZVN7 128 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 MRPL21Q7Z2W9 205 aaKnown RBP12.16□□□□□ -0.46
LIMS2-206ENST00000409754 C1QL2Q7Z5L3 287 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 DRAXINQ8NBI3 349 aaPredicted RBP12.16□□□□□ -0.46
LIMS2-206ENST00000409754 CHST4Q8NCG5 386 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 SLC30A7Q8NEW0 376 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 OR56B1Q8NGI3 324 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 BORCS8Q96FH0 119 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 RNF170Q96K19 258 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 BANF2Q9H503 90 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 SLC7A11Q9UPY5 501 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 STARD10Q9Y365 291 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 DOCK7Q96N67 2140 aa12.16□□□□□ -0.46
LIMS2-206ENST00000409754 TRAV6A0A075B6T7 132 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 A0A0A6YYD4 124 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 A0A1W2PP11 408 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 FAM230AA0A1W2PPH8 454 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 TMEM235A6NFC5 223 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 J3QW42 95 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 LYZL6O75951 148 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 H2AFB2P0C5Z0 115 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 AKAIN1P0CW23 69 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 GTF2F2P13984 249 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 ZNF14P17017 642 aaPredicted RBP12.15□□□□□ -0.46
LIMS2-206ENST00000409754 UQCRFS1P47985 274 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 ATP1B3P54709 279 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 PER3P56645 1201 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 PRSS12P56730 875 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 TAS2R19P59542 299 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 RPS27AP62979 156 aaKnown RBP12.15□□□□□ -0.46
LIMS2-206ENST00000409754 SFRP4Q6FHJ7 346 aaPredicted RBP12.15□□□□□ -0.46
LIMS2-206ENST00000409754 MOB3CQ70IA8 216 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 GABRG1Q8N1C3 465 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 FAM89BQ8N5H3 189 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 TMEM229BQ8NBD8 167 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 CSNK2A3Q8NEV1 391 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 STEAP2Q8NFT2 490 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 OR56B4Q8NH76 319 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 CMBLQ96DG6 245 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 MS4A3Q96HJ5 214 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 513.4 ms