RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ZDHHC23Q8IYP9 409 aa10.69□□□□□ -0.7
CHMP3-204ENST00000409727 BATF2Q8N1L9 274 aa10.69□□□□□ -0.7
CHMP3-204ENST00000409727 FAM169BQ8N8A8 192 aa10.69□□□□□ -0.7
CHMP3-204ENST00000409727 ACBD4Q8NC06 268 aa10.69□□□□□ -0.7
CHMP3-204ENST00000409727 KLF14Q8TD94 323 aaPredicted RBP10.69□□□□□ -0.7
CHMP3-204ENST00000409727 S100A13Q99584 98 aa10.69□□□□□ -0.7
CHMP3-204ENST00000409727 POLEQ07864 2286 aa10.69□□□□□ -0.7
CHMP3-204ENST00000409727 LDLRAD4O15165 306 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 ICMTO60725 284 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 CRTAPO75718 401 aaPredicted RBP10.68□□□□□ -0.7
CHMP3-204ENST00000409727 MPIG6BO95866 241 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 CRYAAP02489 173 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 SERPINA2P20848 420 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 CHRNB4P30926 498 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 PSG7Q13046 419 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 SNTB2Q13425 540 aaKnown RBP10.68□□□□□ -0.7
CHMP3-204ENST00000409727 CDSNQ15517 529 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 TMEM255AQ5JRV8 349 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 TRIQKQ629K1 86 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 VHLLQ6RSH7 139 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 FBXW12Q6X9E4 464 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 LHFPL2Q6ZUX7 228 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 CDH26Q8IXH8 852 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 TMEM104Q8NE00 496 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 HPSE2Q8WWQ2 592 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 MARS2Q96GW9 593 aaKnown RBP10.68□□□□□ -0.7
CHMP3-204ENST00000409727 NBASA2RRP1 2371 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 TRAV18A0A075B6X5 111 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 A0A1B0GVG6 124 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 ATP6V1G2-DDX39BF2Z307 99 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 CST4P01036 141 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 GNLYP22749 145 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 PTBP1P26599 531 aaKnown RBP eCLIP10.68□□□□□ -0.74e-7■□□□□ 10.1
CHMP3-204ENST00000409727 ASCL1P50553 236 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 FUT6P51993 359 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 ATP1B3P54709 279 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 TAS2R20P59543 309 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 QRFPP83859 136 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 DGCR2P98153 550 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 PITPNAQ00169 270 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 MOGAT2Q3SYC2 334 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 SEZ6L2Q6UXD5 910 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 UNQ6126/PRO20091Q6UXV3 157 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 POC5Q8NA72 575 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 CA5BP1Q8WTZ4 195 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 C1orf147Q96MC9 270 aaPredicted RBP10.68□□□□□ -0.7
CHMP3-204ENST00000409727 HIST1H2AAQ96QV6 131 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 BCL2L14Q9BZR8 327 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 FGF23Q9GZV9 251 aaPredicted RBP10.68□□□□□ -0.7
CHMP3-204ENST00000409727 ZMAT3Q9HA38 289 aaKnown RBP10.68□□□□□ -0.7
CHMP3-204ENST00000409727 MOV10Q9HCE1 1003 aaKnown RBP10.68□□□□□ -0.7
CHMP3-204ENST00000409727 DIABLOQ9NR28 239 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 RAB22AQ9UL26 194 aa10.68□□□□□ -0.7
CHMP3-204ENST00000409727 IGHV3-64DA0A0J9YX35 117 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 LANCL1O43813 399 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 CDC14BO60729 498 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 THBDP07204 575 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 CD3GP09693 182 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 RAC2P15153 192 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 GRNP28799 593 aaKnown RBP10.67□□□□□ -0.7
CHMP3-204ENST00000409727 NR4A2P43354 598 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 PTH2RP49190 550 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 INPP1P49441 399 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 ZP1P60852 638 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 CEACAM21Q3KPI0 293 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 BAIAP2L2Q6UXY1 529 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 CALHM1Q8IU99 346 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 OR8S1Q8NH09 359 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 CPNE2Q96FN4 548 aaPredicted RBP10.67□□□□□ -0.7
CHMP3-204ENST00000409727 RNF170Q96K19 258 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 WFIKKN1Q96NZ8 548 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 TECTBQ96PL2 329 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 NICN1Q9BSH3 213 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 THAP7Q9BT49 309 aaPredicted RBP10.67□□□□□ -0.7
CHMP3-204ENST00000409727 AUNIPQ9H7T9 357 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 CACNA1BQ00975 2339 aa10.67□□□□□ -0.7
CHMP3-204ENST00000409727 TMEM14DPA8MWL7 114 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 ZNF732B4DXR9 585 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 XRCC3O43542 346 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 TIMM8AO60220 97 aaPredicted RBP10.66□□□□□ -0.7
CHMP3-204ENST00000409727 HLA-DQB1P01920 261 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 CD40P25942 277 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 GCH1P30793 250 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 HAAOP46952 286 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 VEGFCP49767 419 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 CAPZA1P52907 286 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 TLE1Q04724 770 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 RSU1Q15404 277 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 ZNF57Q68EA5 555 aaPredicted RBP10.66□□□□□ -0.7
CHMP3-204ENST00000409727 C19orf18Q8NEA5 215 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 ITPKCQ96DU7 683 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 TMEM59Q9BXS4 323 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 DUSP13Q9UII6 198 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 USP24Q9UPU5 2620 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 HEATR1Q9H583 2144 aaKnown RBP10.66□□□□□ -0.7
CHMP3-204ENST00000409727 hCG_2014768A0A024R1R8 64 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 PQLC2LA1A4F0 135 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 METTL21EPA6NDL7 271 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 HTR3BO95264 441 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 UBBP0CG47 229 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms