RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 CA7P43166 264 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 ALDH3B1P43353 468 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 INPP1P49441 399 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 SRP9P49458 86 aaKnown RBP12.08□□□□□ -0.48
GPNMB-203ENST00000409458 UCP2P55851 309 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 PPA1Q15181 289 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 SLC22A6Q4U2R8 563 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 ZNF57Q68EA5 555 aaPredicted RBP12.08□□□□□ -0.48
GPNMB-203ENST00000409458 OR2T2Q6IF00 324 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 OR1J1Q8NGS3 322 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 OR52I2Q8NH67 350 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 SLC25A40Q8TBP6 338 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 RND1Q92730 232 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 PHF21AQ96BD5 680 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 NICN1Q9BSH3 213 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 BANF2Q9H503 90 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 NEK6Q9HC98 313 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 NPAP1Q9NZP6 1156 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 ING4Q9UNL4 249 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 SLC7A11Q9UPY5 501 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 PRR14LQ5THK1 2151 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 MAP1BP46821 2468 aaKnown RBP12.08□□□□□ -0.48
GPNMB-203ENST00000409458 ITPR1Q14643 2758 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 A0A0A6YYD4 124 aa12.07□□□□□ -0.48
GPNMB-203ENST00000409458 MEIOCA2RUB1 952 aa12.07□□□□□ -0.48
GPNMB-203ENST00000409458 WIPF3A6NGB9 483 aa12.07□□□□□ -0.48
GPNMB-203ENST00000409458 TPPPO94811 219 aa12.07□□□□□ -0.48
GPNMB-203ENST00000409458 PLATP00750 562 aa12.07□□□□□ -0.48
GPNMB-203ENST00000409458 RBP2P50120 134 aa12.07□□□□□ -0.48
GPNMB-203ENST00000409458 ZNF83P51522 516 aa12.07□□□□□ -0.48
GPNMB-203ENST00000409458 FUT6P51993 359 aa12.07□□□□□ -0.48
GPNMB-203ENST00000409458 CASP6P55212 293 aa12.07□□□□□ -0.48
GPNMB-203ENST00000409458 TMEM255AQ5JRV8 349 aa12.07□□□□□ -0.48
GPNMB-203ENST00000409458 TMEM211Q6ICI0 200 aa12.07□□□□□ -0.48
GPNMB-203ENST00000409458 ALKBH2Q6NS38 261 aa12.07□□□□□ -0.48
GPNMB-203ENST00000409458 NRARPQ7Z6K4 114 aa12.07□□□□□ -0.48
GPNMB-203ENST00000409458 ZDHHC23Q8IYP9 409 aa12.07□□□□□ -0.48
GPNMB-203ENST00000409458 STEAP2Q8NFT2 490 aa12.07□□□□□ -0.48
GPNMB-203ENST00000409458 OR10K1Q8NGX5 313 aa12.07□□□□□ -0.48
GPNMB-203ENST00000409458 CPNE2Q96FN4 548 aaPredicted RBP12.07□□□□□ -0.48
GPNMB-203ENST00000409458 LPAR5Q9H1C0 372 aa12.07□□□□□ -0.48
GPNMB-203ENST00000409458 A0A0A6YYH2 397 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 PQLC2LA1A4F0 135 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 A6NJ64 397 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 M0R1B8 84 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 RAB27BO00194 218 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 SPRY1O43609 319 aaPredicted RBP12.06□□□□□ -0.48
GPNMB-203ENST00000409458 ANGPTL7O43827 346 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 CRTAPO75718 401 aaPredicted RBP12.06□□□□□ -0.48
GPNMB-203ENST00000409458 SERPINA2P20848 420 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 MPV17P39210 176 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 GDNFP39905 211 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 RANBP1P43487 201 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 ATP1B3P54709 279 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 MRPS10P82664 201 aaKnown RBP12.06□□□□□ -0.48
GPNMB-203ENST00000409458 NAAAQ02083 359 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 HACD4Q5VWC8 232 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 SEZ6L2Q6UXD5 910 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 C22orf34Q6ZV56 151 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 RTN4RL2Q86UN3 420 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 FTMTQ8N4E7 242 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 KCNG3Q8TAE7 436 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 C15orf40Q8WUR7 153 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 CMBLQ96DG6 245 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 NEDD4LQ96PU5 975 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 TMEM59Q9BXS4 323 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 MOV10Q9HCE1 1003 aaKnown RBP12.06□□□□□ -0.48
GPNMB-203ENST00000409458 ELOVL5Q9NYP7 299 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 GHRLQ9UBU3 117 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 OSGIN2Q9Y236 505 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 ATRXP46100 2492 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 METTL21EPA6NDL7 271 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 ANKRD30BLA7E2S9 258 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 LYRM1O43325 122 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 TMEM225BP0DP42 221 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 VEGFCP49767 419 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 GUCA2AQ02747 115 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 CEACAM21Q3KPI0 293 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 CCBE1Q6UXH8 406 aaPredicted RBP12.06□□□□□ -0.48
GPNMB-203ENST00000409458 DNM1P46Q6ZS02 220 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 TOMM5Q8N4H5 51 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 FCAMRQ8WWV6 532 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 MUCL1Q96DR8 90 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 MARS2Q96GW9 593 aaKnown RBP12.06□□□□□ -0.48
GPNMB-203ENST00000409458 S100A13Q99584 98 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 SLC22A4Q9H015 551 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 CST11Q9H112 138 aa12.06□□□□□ -0.48
GPNMB-203ENST00000409458 ZMAT3Q9HA38 289 aaKnown RBP12.06□□□□□ -0.48
GPNMB-203ENST00000409458 ELL3Q9HB65 397 aaPredicted RBP12.06□□□□□ -0.48
GPNMB-203ENST00000409458 RBMX2Q9Y388 322 aaKnown RBP12.06□□□□□ -0.48
GPNMB-203ENST00000409458 RP1L1Q8IWN7 2480 aaPredicted RBP12.05□□□□□ -0.48
GPNMB-203ENST00000409458 NBEAQ8NFP9 2946 aa12.05□□□□□ -0.48
GPNMB-203ENST00000409458 IGKV1-12A0A0C4DH73 117 aa12.05□□□□□ -0.48
GPNMB-203ENST00000409458 ORC5O43913 435 aa12.05□□□□□ -0.48
GPNMB-203ENST00000409458 IGKV1D-12P01611 117 aa12.05□□□□□ -0.48
GPNMB-203ENST00000409458 RAC2P15153 192 aa12.05□□□□□ -0.48
GPNMB-203ENST00000409458 MGMTP16455 207 aa12.05□□□□□ -0.48
GPNMB-203ENST00000409458 GPM6AP51674 278 aa12.05□□□□□ -0.48
GPNMB-203ENST00000409458 KLF9Q13886 244 aaPredicted RBP12.05□□□□□ -0.48
GPNMB-203ENST00000409458 ALKBH6Q3KRA9 238 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms